DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmt-1 and ABCB23

DIOPT Version :9

Sequence 1:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_567813.1 Gene:ABCB23 / 828981 AraportID:AT4G28630 Length:678 Species:Arabidopsis thaliana


Alignment Length:618 Identity:264/618 - (42%)
Similarity:387/618 - (62%) Gaps:18/618 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 TANESQGNVQTGSAFRNGWRK-LRTVFPYLWPKKNIALQIAVIVCIILLLAGRVIKLFLPIYRKK 274
            |:..:|...:|.|:     :| |||:..|||.|.|..|:..||..:..|:..:.:.:.:|...|.
plant    67 TSTPNQDQTKTASS-----KKILRTISSYLWMKDNPELRFRVIAALACLIGAKFLNVQVPFLFKL 126

  Fly   275 LVD---SLTIAPIVFRWDFVLIYVAL--SFLQGGGTGSMG--LFNNLRTFLWIRVQQYTTREIEI 332
            .:|   |.:.:.|.....::|...|.  |.|.|.|....|  .||.|||.::.:|...|.|.:..
plant   127 SIDLLSSYSSSTITDSNPYLLAAFATPSSVLIGYGIARSGSSAFNELRTAVFSKVSLRTIRSVSR 191

  Fly   333 ELFRHLHQLSLRWHLQRKTGEVLRVMDRGTDSINNLLNYIVFSIAPTILDLLVAVAYFVYAFNWW 397
            ::..|||.|.||:||.|:||.:.|::|||:.:||.:|:.:||::.||||::.:......|.|...
plant   192 KVLSHLHDLDLRYHLNRETGALNRIIDRGSRAINTILSAMVFNVVPTILEISMVTGILAYNFGPV 256

  Fly   398 FGLIVFLTMFLYIASTIAITEWRTKYQRRMNLADNEQRARSVDSLLNFETVKYYGAEHYEVDCYR 462
            |.||..|::..|||.|:.:|::|||:::.||.|||:...|::|||:|:|||||:..|.||...|.
plant   257 FALITSLSVGSYIAFTLVVTQYRTKFRKAMNQADNDASTRAIDSLVNYETVKYFNNEDYEARKYD 321

  Fly   463 EAILKYQKEEFLSMLTLNMLNTAQNIILCLGLLAGSLLCVYLVVHHQTLTVGDFVLFSTYLMELY 527
            :.:.:|:.....:..:|..|:..|:.|....|....:||...:::.: :||||.|:.:..|.:|.
plant   322 DLLGRYEDAALQTQKSLAFLDFGQSFIFSTALSTSMVLCSQGIMNGE-MTVGDLVMVNGLLFQLS 385

  Fly   528 MPLNWFGTYYRAIQKNFVDMENMFDLLKEEEEIVD---APGCSPLLTAGGGIEFSNVTFGYSPEK 589
            :||.:.|..||...:..|||:::|.||:|..:|.|   .....||:..||.|.|.||.|.|.||:
plant   386 LPLYFLGGVYRETVQGLVDMKSLFQLLEERSDIGDKDTETKLPPLVLRGGSISFENVHFSYLPER 450

  Fly   590 IVLRNVSFTVPAGKTVAIVGPSGAGKSTIMRLLFRFYDVQTGAILIDGQNIKLVQQQSLRKAIGV 654
            .:|..:||.|||||:|||||.||:|||||:|::|||:|..:|.:.||||:||.|..:|||..|||
plant   451 KILDGISFEVPAGKSVAIVGSSGSGKSTILRMIFRFFDTDSGNVRIDGQDIKEVTLESLRSCIGV 515

  Fly   655 VPQDTVLFNNTIFYNIEYAKLGASDEAVYEAARAADIHERILGFPEKYETKVGERGLRLSGGEKQ 719
            |||||||||:|||:||.|..|.|::|.||:|||.|.||:.|:.||:||.|.||||||.|||||||
plant   516 VPQDTVLFNDTIFHNIHYGNLSATEEEVYDAARRAVIHDTIMKFPDKYSTAVGERGLMLSGGEKQ 580

  Fly   720 RVAIARTLLKAPIIVLLDEATSALDTHTERNIQAALARVCANRTTIIVAHRLSTIIHADEILVLQ 784
            |||:||..||:|.|:|.||||:|||:.||..|......:.:|||.|.:||||:|.:..|||:|::
plant   581 RVALARAFLKSPAILLCDEATNALDSKTEAEIMKTFRSLASNRTCIFIAHRLTTAMQCDEIIVME 645

  Fly   785 QGSIAERGRHEELVLREDGIYADMWQQQLKNLD 817
            :|.:.|:|.| :::|.:.|.||.:|.||...|:
plant   646 KGKVVEKGTH-QVLLEKSGRYAKLWTQQNSTLE 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:292803 10/30 (33%)
ABC_membrane 255..530 CDD:279056 93/281 (33%)
ATM1 314..811 CDD:227590 230/499 (46%)
ABCC_ATM1_transporter 576..812 CDD:213220 134/235 (57%)
ABCB23NP_567813.1 ABC_membrane 107..388 CDD:279056 93/281 (33%)
ATM1 173..671 CDD:227590 230/499 (46%)
ABCC_ATM1_transporter 437..672 CDD:213220 134/235 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 206 1.000 Domainoid score I823
eggNOG 1 0.900 - - E1_COG5265
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248727at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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