DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmt-1 and Abcb6

DIOPT Version :10

Sequence 1:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_076221.1 Gene:Abcb6 / 74104 MGIID:1921354 Length:842 Species:Mus musculus


Alignment Length:848 Identity:439/848 - (51%)
Similarity:569/848 - (67%) Gaps:39/848 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YCPPNVTLSEVWTQHGISHCFMDTVGPAVYGGFLLLFG--SIQLLMYRKYATRITDPTQIS---- 61
            ||.........|||:|:|.||..|:.|:.    ||..|  ::.|::.|:.......|.::|    
Mouse     7 YCETEGPAGPAWTQNGLSPCFFFTLVPST----LLTLGVLALVLVLPRRRREVPAGPEELSWAAG 67

  Fly    62 -KSRLFAMQLFLLLL---LPVLALLRFLMNARIYPDSAVYGYMIFSTCVVCFSYPFSICLILKER 122
             :...:.:||||..|   ||:..|...:..||   ...:.||::.::.:...:....:.|::.||
Mouse    68 PRVAPYVLQLFLATLQMALPLAGLAGRVGTAR---GVRLPGYLLLASVLESLASVCGLWLLVVER 129

  Fly   123 YYQLPSMPTRG------HGLVLLLFWTLAFINESLAFINLRHEDWWFHLKTNKDQIEMGLFVTRF 181
            .....|: ..|      |.|.|||.||:.|..|:||.::.....||:.......|::.||:|.|:
Mouse   130 SQARQSL-AMGVWMKFRHSLGLLLLWTVTFAAENLALVSWNSPQWWWARADLGQQVQFGLWVLRY 193

  Fly   182 LCSLLIFVLGLKAPGIM-APYNPHQRLDNDTANESQG-NVQTGSAFRNGWRKLRTVFPYLWPKKN 244
            :.|..:|:|||.|||:. ..|..|...::.....:|| :....|.:|:..||||.:..||||:.:
Mouse   194 VTSGGLFILGLWAPGLRPQSYTLHVHEEDQDVGGNQGRSTDRRSTWRDLGRKLRLLSSYLWPRGS 258

  Fly   245 IALQIAVIVCIILLLAGRVIKLFLPIYRKKLVDSLTI-APIVFRWD----FVLIYVALSFLQGGG 304
            .:||:.|::|:.|:...|.:.:.:||:.:.:|:.||. ||    |.    .|..||.|.||||||
Mouse   259 PSLQLIVLICLGLMGLERALNVLVPIFYRDIVNLLTAKAP----WSSLAWTVTTYVFLKFLQGGG 319

  Fly   305 TGSMGLFNNLRTFLWIRVQQYTTREIEIELFRHLHQLSLRWHLQRKTGEVLRVMDRGTDSINNLL 369
            |||.|..:||||||||||||:|:|.:|:.||.|||:|||||||.|:||||||::||||.|:..||
Mouse   320 TGSTGFVSNLRTFLWIRVQQFTSRGVELRLFSHLHELSLRWHLGRRTGEVLRIVDRGTSSVTGLL 384

  Fly   370 NYIVFSIAPTILDLLVAVAYFVYAFNWWFGLIVFLTMFLYIASTIAITEWRTKYQRRMNLADNEQ 434
            :|:||||.||:.|:::.:.||...||.||||||||.|.||:..||.:||||.|::|.||..:|..
Mouse   385 SYLVFSIIPTLADIIIGIIYFSMFFNAWFGLIVFLCMSLYLILTIVVTEWRAKFRRDMNTQENAT 449

  Fly   435 RARSVDSLLNFETVKYYGAEHYEVDCYREAILKYQKEEFLSMLTLNMLNTAQNIILCLGLLAGSL 499
            |||:||||||||||||||||.||||.|||||||:|..|:.|..:|.:||..||:::.||||||||
Mouse   450 RARAVDSLLNFETVKYYGAEGYEVDRYREAILKFQGLEWKSTASLVVLNQTQNLVIGLGLLAGSL 514

  Fly   500 LCVYLVVHHQTLTVGDFVLFSTYLMELYMPLNWFGTYYRAIQKNFVDMENMFDLLKEEEEIVDAP 564
            ||.|. |..|.|.|||||||.||:.:|||||||||||||.||.||:||||||||||||.|:.|.|
Mouse   515 LCAYF-VSEQKLQVGDFVLFGTYITQLYMPLNWFGTYYRMIQTNFIDMENMFDLLKEETEVKDVP 578

  Fly   565 GCSPLLTAGGGIEFSNVTFGYSPEKIVLRNVSFTVPAGKTVAIVGPSGAGKSTIMRLLFRFYDVQ 629
            |..||....|.|||.||.|.|:..:..|::|||||..|:|||:|||||||||||:||||||||:.
Mouse   579 GAGPLRFHKGRIEFENVHFSYADGQETLQDVSFTVMPGQTVALVGPSGAGKSTILRLLFRFYDIS 643

  Fly   630 TGAILIDGQNIKLVQQQSLRKAIGVVPQDTVLFNNTIFYNIEYAKLGASDEAVYEAARAADIHER 694
            :|.|.||||:|..|.|.|||..||||||||||||:||..||.|.::.|.|..|..||:||.||:.
Mouse   644 SGCIRIDGQDISQVTQISLRSHIGVVPQDTVLFNDTIANNIRYGRVTAGDSEVEAAAQAAGIHDA 708

  Fly   695 ILGFPEKYETKVGERGLRLSGGEKQRVAIARTLLKAPIIVLLDEATSALDTHTERNIQAALARVC 759
            ||.|||.|||:||||||:||||||||||||||:||||.|:|||||||||||..||.|||:||:||
Mouse   709 ILSFPEGYETQVGERGLKLSGGEKQRVAIARTILKAPDIILLDEATSALDTSNERAIQASLAKVC 773

  Fly   760 ANRTTIIVAHRLSTIIHADEILVLQQGSIAERGRHEELVLREDGIYADMW--QQQLKNLDAEQSG 822
            .|||||::||||||:::||:|||::.|.|.||||||.|:.| .|:||:||  |||.:....|:|.
Mouse   774 TNRTTIVIAHRLSTVVNADQILVIKDGCIIERGRHEALLSR-GGVYAEMWQLQQQGQETVPEESK 837

  Fly   823 GSD 825
            ..|
Mouse   838 PQD 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:465049 73/255 (29%)
ATM1 222..821 CDD:444078 372/605 (61%)
Abcb6NP_076221.1 Required for ATPase activity. /evidence=ECO:0000250|UniProtKB:Q9NP58 1..236 65/236 (28%)
Required for the lysosomal targeting. /evidence=ECO:0000250|UniProtKB:Q9NP58 1..205 57/205 (28%)
MTABC_N 6..255 CDD:465049 73/255 (29%)
ATM1 232..830 CDD:444078 371/603 (62%)

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