DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmt-1 and abcb7

DIOPT Version :9

Sequence 1:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster
Sequence 2:XP_694879.2 Gene:abcb7 / 566515 ZFINID:ZDB-GENE-050517-10 Length:743 Species:Danio rerio


Alignment Length:601 Identity:264/601 - (43%)
Similarity:371/601 - (61%) Gaps:23/601 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 NGWRKLRTVFPYLWPKKNIALQIAVIVCIILLLAGRVIKLFLPIYRKKLVDS----------LTI 281
            |..:.|..:|.|:|||....|:..|::.:.||...::..:.:|...|..|||          |:.
Zfish   107 NSSKILGAMFTYVWPKDRPDLRARVVISLSLLAGAKITNVMVPFMFKYAVDSLNQMSGHMLNLSD 171

  Fly   282 APIVFRWDFVLIYVALSFLQGGG---TGSMGLFNNLRTFLWIRVQQYTTREIEIELFRHLHQLSL 343
            ||      ..::.:|.:.|.|.|   ||| .|||.||..::.:|.|.:.|.|...:|.|||.|.|
Zfish   172 AP------NTVVTMATAVLIGYGVSRTGS-ALFNELRNAVFGKVAQSSIRRIAKNVFLHLHNLDL 229

  Fly   344 RWHLQRKTGEVLRVMDRGTDSINNLLNYIVFSIAPTILDLLVAVAYFVYAFNWWFGLIVFLTMFL 408
            .:||.|:||.:.:.:||||..|:.:|:.:||::.||:.::::......|.....|.|:...|:..
Zfish   230 GFHLSRQTGALSKAIDRGTRGISFVLSALVFNLGPTLFEMMLVSGILYYKCGGHFALVTLGTLSA 294

  Fly   409 YIASTIAITEWRTKYQRRMNLADNEQRARSVDSLLNFETVKYYGAEHYEVDCYREAILKYQKEEF 473
            |.|.|:|:|:|||:::..||.||||....::|||||:|||||:..|.||.:.|...:..|:....
Zfish   295 YTAFTVAVTQWRTQFRIEMNKADNEAGNAAIDSLLNYETVKYFNNEKYEAERYDGFLKVYESSSL 359

  Fly   474 LSMLTLNMLNTAQNIILCLGLLAGSLLCVYLVVHHQTLTVGDFVLFSTYLMELYMPLNWFGTYYR 538
            .:..||.|||..|:.|..:||.|..:|....:: ..|:||||.|:.:..|.:|.:|||:.||.||
Zfish   360 KTTSTLAMLNFGQSAIFSVGLTAIMVLASKGIM-SGTMTVGDLVMVNGLLFQLSLPLNFLGTVYR 423

  Fly   539 AIQKNFVDMENMFDLLKEEEEIVDAPGCSPLLTA--GGGIEFSNVTFGYSPEKIVLRNVSFTVPA 601
            ..::..:||..:|.||..:.:|.:.....||:..  ...|.|.:|.|.|...:.||..|||.|||
Zfish   424 ETRQALIDMNTLFTLLSVDTKIKEKEMAPPLIVTPQEATIRFEDVYFEYLEGQKVLNGVSFEVPA 488

  Fly   602 GKTVAIVGPSGAGKSTIMRLLFRFYDVQTGAILIDGQNIKLVQQQSLRKAIGVVPQDTVLFNNTI 666
            ||.|||||.||:|||||:|||||||:.|.|.|.|.||||:.|..:|||||:||||||.|||:|||
Zfish   489 GKKVAIVGGSGSGKSTIVRLLFRFYEPQQGNIYIAGQNIRDVGLESLRKAVGVVPQDAVLFHNTI 553

  Fly   667 FYNIEYAKLGASDEAVYEAARAADIHERILGFPEKYETKVGERGLRLSGGEKQRVAIARTLLKAP 731
            |||:.|..:.|:.|.||..||.|.||:.||..|.||:|:||||||:|||||||||||||.:||.|
Zfish   554 FYNLMYGNINATAEDVYRVARLAGIHDAILKMPHKYDTQVGERGLKLSGGEKQRVAIARAILKNP 618

  Fly   732 IIVLLDEATSALDTHTERNIQAALARVCANRTTIIVAHRLSTIIHADEILVLQQGSIAERGRHEE 796
            .|:|.|||||:||:.||.||..::..:..:||::.:|||||||:.||||:||.||.:||||.|:.
Zfish   619 PILLYDEATSSLDSVTEENILTSMKEMVKDRTSVFIAHRLSTIVDADEIIVLNQGKVAERGNHQT 683

  Fly   797 LVLREDGIYADMWQQQ 812
            |:.....:||::|..|
Zfish   684 LLDTPGSLYANLWNTQ 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:292803 4/13 (31%)
ABC_membrane 255..530 CDD:279056 99/287 (34%)
ATM1 314..811 CDD:227590 234/498 (47%)
ABCC_ATM1_transporter 576..812 CDD:213220 140/235 (60%)
abcb7XP_694879.2 ABC_membrane 133..415 CDD:279056 99/289 (34%)
ATM1 200..696 CDD:227590 233/496 (47%)
ABCC_ATM1_transporter 463..699 CDD:213220 140/235 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5265
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248727at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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