DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmt-1 and abcb6a

DIOPT Version :9

Sequence 1:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster
Sequence 2:XP_005160347.1 Gene:abcb6a / 564067 ZFINID:ZDB-GENE-050517-9 Length:851 Species:Danio rerio


Alignment Length:847 Identity:439/847 - (51%)
Similarity:591/847 - (69%) Gaps:33/847 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YCPPNVTLSEVWTQHGISHCFMDTVGPAVYGGFLLLFGSIQLLMYRKYATRITDPTQISKSRLFA 67
            :|...|::.:||.:.|::.||..|:.|:|....|.|||::..:.|.:|.|.: :|..:.:|.|:.
Zfish     7 FCEAGVSMQQVWVEGGLTLCFYFTLVPSVLLTLLFLFGTLLCIWYSRYGTDM-EPKFVPRSGLYR 70

  Fly    68 MQ--LFLLLLLPVLALLRFLMNARIYPDSAVYGYMIFSTCVVCFSYPFSICLILKERYYQLPSMP 130
            :|  |.:||:|..|..:.|    |:...:.:.||::...|:....:.:::.|:..||...|....
Zfish    71 LQVGLSVLLILQALGWMVF----RLSWSAELPGYVVLYGCLSMLGWIWAVVLLRLERRKVLVRDR 131

  Fly   131 TRGHGLVLLLFWTLAFINESLAFINLRHEDWWFHLKTNKDQIEMGLFVTRFLCSLLIFVLGLKAP 195
            ||||..||||:|.:||..::|||::.....||:.|:|::.|:|...::.|:.||.|:|:||||||
Zfish   132 TRGHSTVLLLYWAVAFAADNLAFVSWMSPQWWWSLETSEQQMEFAFWLVRYFCSGLLFLLGLKAP 196

  Fly   196 GIMAPYNPHQRLDNDTANESQGNVQTG-----------SAFRNGWRKLRTVFPYLWPKKNIALQI 249
            |:  |..|:..|    .||.:.:|:.|           |.:::..:|:|.:.||:|||.::.||:
Zfish   197 GL--PRRPYMLL----VNEDERDVEHGAPLLGNSDEDQSTWKDFGKKVRLLVPYMWPKGSVLLQL 255

  Fly   250 AVIVCIILLLAGRVIKLFLPIYRKKLVDSLTIAPIVFRWD----FVLIYVALSFLQGGGTGSMGL 310
            .|::|:.:|...|.|.:|:|||.|.:|:.||...   .|.    .|.:|..|.||||||.|:.|.
Zfish   256 LVLMCLGMLGIERAINVFVPIYYKNIVNQLTDGS---SWKTLAMTVCVYCLLKFLQGGGAGASGF 317

  Fly   311 FNNLRTFLWIRVQQYTTREIEIELFRHLHQLSLRWHLQRKTGEVLRVMDRGTDSINNLLNYIVFS 375
            .:|||:||||||||||.|.:::.||.|||.|||||||.|:||:|||.:||||.|||:||:|||||
Zfish   318 VSNLRSFLWIRVQQYTNRVVQVRLFAHLHALSLRWHLGRRTGDVLRSIDRGTSSINSLLSYIVFS 382

  Fly   376 IAPTILDLLVAVAYFVYAFNWWFGLIVFLTMFLYIASTIAITEWRTKYQRRMNLADNEQRARSVD 440
            |.|||.|:::|:.||:..||.|||||||:.|.||:..||.||||||||:|.||..||..::::||
Zfish   383 IFPTIADIVIAIVYFISNFNAWFGLIVFVCMALYLTLTIFITEWRTKYRRDMNTQDNNAKSKAVD 447

  Fly   441 SLLNFETVKYYGAEHYEVDCYREAILKYQKEEFLSMLTLNMLNTAQNIILCLGLLAGSLLCVYLV 505
            |||||||||||.||.|||..:.:||||||..|:.:..:|.:||..||:|:.||||.|||||.|.|
Zfish   448 SLLNFETVKYYNAESYEVGRFEDAILKYQVSEWKTNASLALLNQTQNLIIGLGLLTGSLLCAYFV 512

  Fly   506 VHHQTLTVGDFVLFSTYLMELYMPLNWFGTYYRAIQKNFVDMENMFDLLKEEEEIVDAPGCSPLL 570
            ...: ..|||:|||.||:::||.||||||||||.||.:|:|||:||.|..||||:.|......|.
Zfish   513 TEGK-FQVGDYVLFGTYIIQLYTPLNWFGTYYRMIQNSFIDMESMFKLFTEEEEVKDEVNAGNLY 576

  Fly   571 TAGGGIEFSNVTFGYSPEKIVLRNVSFTVPAGKTVAIVGPSGAGKSTIMRLLFRFYDVQTGAILI 635
            ...|.:||.||.|.|:..|.:|::|||||..|:|||:||.||:|||||:||||||||||.|.|.|
Zfish   577 FRQGKVEFENVFFSYTQGKEILKDVSFTVLPGQTVALVGQSGSGKSTIIRLLFRFYDVQGGCIKI 641

  Fly   636 DGQNIKLVQQQSLRKAIGVVPQDTVLFNNTIFYNIEYAKLGASDEAVYEAARAADIHERILGFPE 700
            |||:|..|:|.|||..||||||||||||:.|..||.|.::.|:|:.|.|||.|||||::|:|||:
Zfish   642 DGQDISKVKQSSLRAHIGVVPQDTVLFNDNIRDNIRYGRVTATDQEVEEAAIAADIHDKIIGFPD 706

  Fly   701 KYETKVGERGLRLSGGEKQRVAIARTLLKAPIIVLLDEATSALDTHTERNIQAALARVCANRTTI 765
            .|||:||||||:||||||||||||||:||||.|:|||||||||||.|||||||:||:|||||||:
Zfish   707 GYETQVGERGLKLSGGEKQRVAIARTILKAPQIILLDEATSALDTQTERNIQASLAKVCANRTTV 771

  Fly   766 IVAHRLSTIIHADEILVLQQGSIAERGRHEELVLREDGIYADMWQQQLKNLDAEQSGGSDNGDAS 830
            :|||||||||.||.||||:.|.|.|||||||| |.:.|:|:||||:|.:..|::.:..|:..|..
Zfish   772 VVAHRLSTIIGADVILVLRDGQIVERGRHEEL-LAKGGLYSDMWQKQQQAQDSDSASDSETKDRK 835

  Fly   831 AE 832
            :|
Zfish   836 SE 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:292803 79/250 (32%)
ABC_membrane 255..530 CDD:279056 156/278 (56%)
ATM1 314..811 CDD:227590 323/496 (65%)
ABCC_ATM1_transporter 576..812 CDD:213220 166/235 (71%)
abcb6aXP_005160347.1 MTABC_N 6..247 CDD:292803 79/250 (32%)
ABC_membrane 269..536 CDD:279056 154/270 (57%)
ATM1 321..816 CDD:227590 323/496 (65%)
ABCC_ATM1_transporter 582..817 CDD:213220 166/235 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595308
Domainoid 1 1.000 314 1.000 Domainoid score I1261
eggNOG 1 0.900 - - E1_COG5265
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11375
Inparanoid 1 1.050 837 1.000 Inparanoid score I431
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D248727at2759
OrthoFinder 1 1.000 - - FOG0004593
OrthoInspector 1 1.000 - - otm25915
orthoMCL 1 0.900 - - OOG6_100761
Panther 1 1.100 - - LDO PTHR24221
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3271
SonicParanoid 1 1.000 - - X3206
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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