DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmt-1 and ABCB7

DIOPT Version :10

Sequence 1:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_728642.2 Gene:ABCB7 / 38193 FlyBaseID:FBgn0035244 Length:743 Species:Drosophila melanogaster


Alignment Length:685 Identity:271/685 - (39%)
Similarity:396/685 - (57%) Gaps:45/685 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 LLIFVLGLKAPG--------------IMAPYNPHQRLDNDTANESQGNVQTGSAFRNGWRK---- 231
            ||..|.|.||.|              ...||.|.|:    .:.....::..||...:|..|    
  Fly    71 LLGGVFGKKAKGGAPAAAAAKTTTLQRQRPYRPQQQ----QSRLCHVHIGGGSDGGSGLGKLDAP 131

  Fly   232 -------LRTVFPYLWPKKNIALQIAVIVCIILLLAGRVIKLFLPIYRKKLVDSLTIAPIVFRWD 289
                   ||.:..|:|||::..::..|.:.:.||...:::.:.:|...|..||::|...:....|
  Fly   132 EVTSKDMLRAMMAYIWPKEDPLVRKRVGISLGLLAGSKLLTVCVPFLFKGAVDTMTTLNMDTAPD 196

  Fly   290 FVL-IYVALSFLQGGGTGSMGLFNNLRTFLWIRVQQYTTREIEIELFRHLHQLSLRWHLQRKTGE 353
            .|| ...||....|....|...||.||..::.:|..::.|:|...:|.|||.|.|.:||.::||.
  Fly   197 AVLSAATALMLGYGIARASAAGFNELRNAVFAKVAHHSIRKIASNVFLHLHNLDLAFHLNKQTGA 261

  Fly   354 VLRVMDRGTDSINNLLNYIVFSIAPTILDLLVAVAYFVYAFNWWFGLIVFLTMFLYIASTIAITE 418
            :.:.:|||:..||.:|:.:||:|.|||.:|.:..:.........|..:....:.:|.|.|:::|:
  Fly   262 LSKTIDRGSRGINFVLSAMVFNIVPTIFELALVSSILGVKCGLAFAGVSMGCVGIYAAYTLSVTQ 326

  Fly   419 WRTKYQRRMNLADNEQRARSVDSLLNFETVKYYGAEHYEVDCYREAILKYQKEEFLSMLTLNMLN 483
            |||:::..||.|:||...::||||:|:|||||:..|.||..||.|.:.||:.....:..:|.:||
  Fly   327 WRTQFRVFMNQAENEAGNKAVDSLINYETVKYFNNEKYEAGCYNEVLKKYEAASLKTSSSLALLN 391

  Fly   484 TAQNIILCLGLLAGSLLCVYLV--VHHQTLTVGDFVLFSTYLMELYMPLNWFGTYYRAIQKNFVD 546
            ..||.|....|   ||:.|...  :....:||||.|:.:..|.:|.:||.:.|:.||.:::..:|
  Fly   392 FGQNAIFSSAL---SLIMVLAAKEIAQGNMTVGDLVMVNALLFQLSIPLGFLGSVYREVRQALLD 453

  Fly   547 MENMFDLLKEEEEIVDAPGCSPLL--TAGGGIEFSNVTFGYSPEKIVLRNVSFTVPAGKTVAIVG 609
            |..||.|:..:..|..|....||.  |....|||.||:|.|.|.|.:.|::|||:||||.|||||
  Fly   454 MRAMFTLMNVDSSIQTAANAQPLFVDTTNSSIEFRNVSFEYEPGKPIFRDLSFTIPAGKNVAIVG 518

  Fly   610 PSGAGKSTIMRLLFRFYDVQTGAILIDGQNIKLVQQQSLRKAIGVVPQDTVLFNNTIFYNIEYAK 674
            .||:|||:::||||||::..:|.:||.||:|..|..:||||.|.|||||:|||:|||.:||.|..
  Fly   519 GSGSGKSSMVRLLFRFFEPNSGKVLIGGQDISAVDLESLRKVIAVVPQDSVLFHNTIEHNIHYGN 583

  Fly   675 LGASDEAVYEAARAADIHERILGFPEKYETKVGERGLRLSGGEKQRVAIARTLLKAPIIVLLDEA 739
            |..|...|..|||.||:|:.|:.:|.:|.|:||||||:|||||||||||||.:||...|::.|||
  Fly   584 LSKSHAEVQNAARMADLHDSIMSWPGQYSTQVGERGLKLSGGEKQRVAIARAILKNTPILIFDEA 648

  Fly   740 TSALDTHTERNIQAALARVCANRTTIIVAHRLSTIIHADEILVLQQGSIAERGRHEELVLREDGI 804
            ||:||:.||.||..||.|..:.||:|.:||||||:..|||||||:.|.:.|||.|.|| ||::|:
  Fly   649 TSSLDSITEHNILQALTRATSGRTSICIAHRLSTVKDADEILVLENGRVGERGTHSEL-LRQNGL 712

  Fly   805 YADMWQQQLKNLDAEQSGGSDNGDASAESGSEKRR 839
            ||.:|:.|.:..|..:       :.:.|..::|.|
  Fly   713 YARLWETQTQQFDPSR-------EINEEVAAKKTR 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:465049 18/80 (23%)
ATM1 222..821 CDD:444078 257/614 (42%)
ABCB7NP_728642.2 ATM1 147..732 CDD:444078 250/595 (42%)

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