DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmt-1 and Mdr49

DIOPT Version :9

Sequence 1:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_523724.2 Gene:Mdr49 / 36428 FlyBaseID:FBgn0004512 Length:1302 Species:Drosophila melanogaster


Alignment Length:705 Identity:195/705 - (27%)
Similarity:318/705 - (45%) Gaps:148/705 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 IAVIVCIILLLAGRVIKLFLPIY---RKKLVDSL----TIAPIVFRWDFVLIYVALSFLQGG--- 303
            :.|:..::...|...|..|:.||   ...|||..    |.:|.          .||....||   
  Fly    45 LLVVSLLVATAASAFIPYFMIIYGEFTSLLVDRTVGVGTSSPA----------FALPMFGGGQQL 99

  Fly   304 -------------------GTGSMGLFNNLRTFLWIRVQQYTTREIEIELFRHLHQLSLRWHLQR 349
                               |.||  |..::..||.|.:.......|.:.....:.:|.|...|::
  Fly   100 TNASKEENNQAIIDDATAFGIGS--LVGSVAMFLLITLAIDLANRIALNQIDRIRKLFLEAMLRQ 162

  Fly   350 K------------TGEVLRVMDRGTDSINNLLNYIVFSIAPTILDLLVAVAYFVYAFNWWFGLIV 402
            .            ..::...:|:..:.|...:..:||.|...::.:   |:.|||  .|...|:|
  Fly   163 DIAWYDTSSGSNFASKMTEDLDKLKEGIGEKIVIVVFLIMTFVIGI---VSAFVY--GWKLTLVV 222

  Fly   403 FLTMFLYIASTIAITEWRTKYQRRMNLADNEQRARS-----VDSLLN-FETVKYYGAEHYEVDCY 461
            ...:...||:|..:.      :.:.:||:.|.::.|     |:.:.: ..||..:..:..|    
  Fly   223 LSCVPFIIAATSVVA------RLQGSLAEKELKSYSDAANVVEEVFSGIRTVFAFSGQEKE---- 277

  Fly   462 REAILKYQKEEFLSMLTLNMLNTAQNIILCLGLLAGS---------LLCVYLVVHHQTLTVGD-- 515
                    ||.|..:|.     .|:|.....||.:|.         .||:.|.:.:....:.|  
  Fly   278 --------KERFGKLLI-----PAENTGRKKGLYSGMGNALSWLIIYLCMALAIWYGVTLILDER 329

  Fly   516 -------------FVLFSTYLMELYMPLNWFGTYYRAIQKNFVDMENMFDLLKEEEEI--VDAPG 565
                         .|||:..:..  ..|.:...:..||.......:.:|:::....::  :|..|
  Fly   330 DLPDRVYTPAVLVIVLFAVIMGA--QNLGFASPHVEAIAVATAAGQTLFNIIDRPSQVDPMDEKG 392

  Fly   566 CSPLLTAGGGIEFSNVTFGY--SPEKIVLRNVSFTVPAGKTVAIVGPSGAGKSTIMRLLFRFYDV 628
            ..|..|| |.|.|..:.|.|  .|:..:|:.::..|..|:|||.||.||.||||:::|:.||||.
  Fly   393 NRPENTA-GHIRFEGIRFRYPARPDVEILKGLTVDVLPGQTVAFVGASGCGKSTLIQLMQRFYDP 456

  Fly   629 QTGAILIDGQNIKLVQQQSLRKAIGVVPQDTVLFNNTIFYNIEYAKLGASDEAVYEAARAADIHE 693
            :.|::.:||::::.:....||..||||.|:.|||..||..||.|.:..|:...:.:|||||:.|:
  Fly   457 EAGSVKLDGRDLRTLNVGWLRSQIGVVGQEPVLFATTIGENIRYGRPSATQADIEKAARAANCHD 521

  Fly   694 RILGFPEKYETKVGERGLRLSGGEKQRVAIARTLLKAPIIVLLDEATSALDTHTERNIQAALARV 758
            .|...|:.|:|:|||:|.::|||:|||:||||.|::.|.::||||||||||..:|:.:|:||...
  Fly   522 FITRLPKGYDTQVGEKGAQISGGQKQRIAIARALVRQPQVLLLDEATSALDPTSEKRVQSALELA 586

  Fly   759 CANRTTIIVAHRLSTIIHADEILVLQQGSIAERGRHEELVLREDGIYADMWQ------------- 810
            ....||::||||||||.:||:|:.|:.|.:||:|.||||:.|. |:|.::..             
  Fly   587 SQGPTTLVVAHRLSTITNADKIVFLKDGVVAEQGTHEELMERR-GLYCELVSITQRKEATEADEG 650

  Fly   811 -------QQLKNLDAEQSGGSDNGDASAESGSEKRRAGGAGGPSGTGTGGAHFRA 858
                   |:.:||..|::  .|:.:...|....:.:..|:...||       |||
  Fly   651 AVAGRPLQKSQNLSDEET--DDDEEDEEEDEEPELQTSGSSRDSG-------FRA 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:292803
ABC_membrane 255..530 CDD:279056 64/345 (19%)
ATM1 314..811 CDD:227590 164/562 (29%)
ABCC_ATM1_transporter 576..812 CDD:213220 108/257 (42%)
Mdr49NP_523724.2 MdlB 34..640 CDD:224055 183/638 (29%)
ABC_membrane 116..352 CDD:279056 50/265 (19%)
ABC_MTABC3_MDL1_MDL2 402..636 CDD:213216 108/234 (46%)
MdlB 735..1299 CDD:224055
ABC_membrane 739..998 CDD:279056
ABC_MTABC3_MDL1_MDL2 1059..1298 CDD:213216
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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