DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hmt-1 and CG1824

DIOPT Version :9

Sequence 1:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster


Alignment Length:821 Identity:223/821 - (27%)
Similarity:353/821 - (42%) Gaps:195/821 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 QLPSMPTRGHGLVL----LLFWTLAFINESLAFINLRHEDWW-------FHLKTNKDQIEMGLFV 178
            |.|::|......:|    ||.|.    ..||| |.|....||       .|.:.::..|.     
  Fly    49 QPPAIPPTNASRLLQTTRLLVWG----GGSLA-IGLGARSWWAGHRGAIVHCEGSRLAIR----- 103

  Fly   179 TRFLCSLLIFVLGLKAPGIMAPYNPHQRLDNDTANESQGNVQTGSAFRNGWRKLRTVF-PYLWPK 242
                                     .:..:.|||:|...:          |::|.|.. |:||  
  Fly   104 -------------------------KEEEEEDTASEQHFD----------WKRLWTYLEPHLW-- 131

  Fly   243 KNIALQIAVIVCIILLLAGRVIKLFLPIYRKKLVDSLTIAPIVFRWD-----FV-------LIYV 295
                 ::...||..|::|  .|.:.:|.....||::|......:..|     ||       ...:
  Fly   132 -----ELIGAVCAALIVA--YINIRIPNLLGDLVNTLARYANTYVMDPINNSFVKDVSKPASNLL 189

  Fly   296 ALSFLQGGGTGSMGLFNNLRTFLWIRVQQYTTREIEIELFRHLHQLSLRWHLQRKTGEVL----- 355
            :|..||.|       |..:..:|..||.:....::..:||..:....:.:..:.:|||::     
  Fly   190 SLYMLQSG-------FTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFDENRTGELVNRLTA 247

  Fly   356 ----------RVMDRGTDSINNLL--NYIVFSIAPTILDLLVAVAYFVYAFNWWFGLIVFLTMFL 408
                      :.:.:|..|...|:  :..:|.|:|.:..:.:|....|..|..:.|         
  Fly   248 DVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAIALASVPCVVMFMTYLG--------- 303

  Fly   409 YIASTIAITEWRTKYQRRMNLADNEQRARSV----DSLLNFETVKYYGAEHYEVDCY----REAI 465
                         |..|.::.:...|..|:.    ::|.|..||:....|:.|:..:    .||.
  Fly   304 -------------KKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAA 355

  Fly   466 LKYQK------------EEFLSMLTLNMLNTAQNIILCLGLLAGSLLCVYLVVH---HQTLTVGD 515
            ...||            ..||:.|.|:.|....:::....|..|:|: .:||..   .::|..|.
  Fly   356 RLAQKLGYGIAIFQGLTNFFLNTLVLSTLFMGGHLMSTESLSPGALM-AFLVASQGVQRSLAQGS 419

  Fly   516 FVLFSTYLMELYMPLNWFGTYYRAIQK-----NFVDMENMFDLLK----EEEEIVDAPGCSPLLT 571
            .:|               ||..|.:..     .|:.::...:||:    .:|.:           
  Fly   420 ILL---------------GTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQERL----------- 458

  Fly   572 AGGGIEFSNVTFGY--SPEKIVLRNVSFTVPAGKTVAIVGPSGAGKSTIMRLLFRFYDVQTGAIL 634
             .|.|.|.||:|.|  .|:.:||::.|.|:..|:|||:||.||:|||||..|:.|||:...|.|.
  Fly   459 -HGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIK 522

  Fly   635 IDGQNIKLVQQQSLR-KAIGVVPQDTVLFNNTIFYNIEYAKLGASDEAVYEAARAADIHERILGF 698
            :||..:..:....|| ..:|.:.|..|||..:|..||.|.|..|.:|.||.|||.:..|:.:...
  Fly   523 LDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTAL 587

  Fly   699 PEKYETKVGERGLRLSGGEKQRVAIARTLLKAPIIVLLDEATSALDTHTERNIQAALARVCANRT 763
            |:.|.|.|||||.:||||::||:||||.|||.|.|::|||||||||..:|..:|.||..|..|||
  Fly   588 PDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRT 652

  Fly   764 TIIVAHRLSTIIHADEILVLQQGSIAERGRHEELVLREDGIYADMWQQQLKNLDAEQSGGSDNGD 828
            |:::|||||||.:||.|:||.||.:.|.|:|:|| :.:.|:|.::.:||.:....||....::..
  Fly   653 TLVIAHRLSTIRNADLIVVLDQGRVVETGKHDEL-MGKRGLYFELVRQQERRDIQEQVQAVEDVV 716

  Fly   829 A-------SAESGSEKRRAGGAGGPSGTGTGGAHFRAGHAH 862
            |       :.|:.:....|..|...:.|.|.|:....|.|:
  Fly   717 AVKEQQATATETSTAATIATAAETSAATVTVGSSSFGGRAN 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:292803 25/127 (20%)
ABC_membrane 255..530 CDD:279056 60/326 (18%)
ATM1 314..811 CDD:227590 167/548 (30%)
ABCC_ATM1_transporter 576..812 CDD:213220 114/238 (48%)
CG1824NP_572810.1 MdlB 119..701 CDD:224055 191/648 (29%)
ABC_membrane 137..415 CDD:279056 59/309 (19%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 114/238 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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