DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmt-1 and hmt-1

DIOPT Version :9

Sequence 1:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_001022812.1 Gene:hmt-1 / 176540 WormBaseID:WBGene00001815 Length:801 Species:Caenorhabditis elegans


Alignment Length:838 Identity:382/838 - (45%)
Similarity:522/838 - (62%) Gaps:84/838 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VGPA--------VYGGFLLLFGSIQLLM---------YRKYATRITDPTQISKSRL-FAMQLFLL 73
            :||:        || .|.::...|.|.:         ||    |:||....|.|:| .:..|.:.
 Worm    18 IGPSCNKIISFGVY-TFFIVVNFIVLCIPNSNSANNNYR----RMTDDDASSTSKLTISKILSIC 77

  Fly    74 LLLPVL--ALLRFLMNARIYPDSAVYGYMIFSTCV-VCFSYPFSICLILKERYYQLPSMPTRGHG 135
            .:..|:  ::..|......:|    |.:::.:.|| ..|.:..|:|...|.|  ..||.|.    
 Worm    78 TIFAVICQSIFYFCFTFYFHP----YTHLLLAFCVSKLFFWILSLCSFSKWR--NQPSTPI---- 132

  Fly   136 LVLLLFWTLAFINESLAFIN-LRHEDWWFHLK-TNKDQIEMGLFVTRFLCSLLIF----VLGLKA 194
                   :|||...:...|: :...||..:.: |:|::.::..::.......::|    |.||  
 Worm   133 -------SLAFAFSAALLIHCIPLTDWKKYFEPTSKNRGDLTFYIIELALVTVVFFFTIVTGL-- 188

  Fly   195 PGIMAPYNPHQRLDNDTANESQGNVQTGSAFRNGWRKLRTVFPYLWPKKNIALQIAVIVCIILLL 259
                  :|            ..|.....||:.|..:|:.||.||:||.|:|:||:.|:.|:.||:
 Worm   189 ------FN------------FSGCSSRESAWNNLSKKVVTVAPYIWPTKSISLQLRVVFCLFLLI 235

  Fly   260 AGRVIKLFLPIYRKKLVDSLTIAPIVFRWDFVLIYVALSFLQGGGTGSMGLF-NNLRTFLWIRVQ 323
            .||:|.:.|||..|.:||.|. .|..|::..:.:...|.|||  |.|:||.| |.:||:|||.:|
 Worm   236 IGRLINVSLPILSKWIVDELA-TPDTFQYSLLFLATFLKFLQ--GNGAMGGFLNTVRTYLWIPIQ 297

  Fly   324 QYTTREIEIELFRHLHQLSLRWHLQRKTGEVLRVMDRGTDSINNLLNYIVFSIAPTILDLLVAVA 388
            ||||||:|:|||:|||.|||||||.||||:|||||||||.|:||:||||:|::.|||.|:::||.
 Worm   298 QYTTRELEVELFKHLHSLSLRWHLSRKTGQVLRVMDRGTSSVNNILNYILFNVVPTIADIVIAVI 362

  Fly   389 YFVYAFNWWFGLIVFLTMFLYIASTIAITEWRTKYQRRMNLADNEQRARSVDSLLNFETVKYYGA 453
            :|..|||.:||||||.||.||:..||:||||||:|.|..|..||...|.:.|||:|:|||||||.
 Worm   363 FFFSAFNAYFGLIVFGTMALYLTVTISITEWRTQYIREANEKDNATSAIATDSLINYETVKYYGN 427

  Fly   454 EHYEVDCYREAILKYQKEEFLSMLTLNMLNTAQNIILCLGLLAGSLLCVYLVVHHQTLTVGDFVL 518
            |.:||:.::.||..||..|:.:..:|..||..||.|:.:|::.||:..||::||.:||||||:||
 Worm   428 EEFEVNRFKNAIESYQVTEWKTQASLAFLNCLQNAIIGIGMIGGSVFVVYMIVHEKTLTVGDYVL 492

  Fly   519 FSTYLMELYMPLNWFGTYYRAIQKNFVDMENMFDLLKEEEEIVDAPGCSPLLTAGGGIEFSNVTF 583
            |:|||::||.|||:|||.||.|||.||||||||||:.:|.|:.|.|...|.....|.|...|:||
 Worm   493 FTTYLLQLYTPLNFFGTIYRVIQKAFVDMENMFDLMNDEVEVKDLPHALPYTDPRGTISVKNLTF 557

  Fly   584 GYSPEKIVLRNVSFTVPAGKTVAIVGPSGAGKSTIMRLLFRFYDVQTGAILIDGQNIKLVQQQSL 648
            .|:....|::|:||.:..|:|||:||.||:||||::|||||.::...|:|..||.:::.....||
 Worm   558 EYNTGLPVIKNISFEIGNGQTVALVGSSGSGKSTLIRLLFRLFESTEGSIEFDGIDVRNYTMHSL 622

  Fly   649 RKAIGVVPQDTVLFNNTIFYNIEYAKLGASDEAVYEAARAADIHERILGFPEKYETKVGERGLRL 713
            |:.||:|||||||||:||.|||.:.:..||||.|.|||:||.|||:|...||.|.|.||||||:|
 Worm   623 RQQIGIVPQDTVLFNDTIMYNIRFGRPDASDEEVIEAAKAAMIHEKITSLPEGYATMVGERGLKL 687

  Fly   714 SGGEKQRVAIARTLLKAPIIVLLDEATSALDTHTERNIQAALARVCANRTTIIVAHRLSTIIHAD 778
            |||||||||||||:||.|..:.||||||||||.|||.||..|.::|.:||.::|||||||:::||
 Worm   688 SGGEKQRVAIARTILKKPQFIFLDEATSALDTPTERAIQKCLEKLCKSRTGVVVAHRLSTVVNAD 752

  Fly   779 EILVLQQGSIAERGRHEELVLREDGIYADMWQQQLKNLDAEQSGGSDNGDASAESGSE 836
            .||||.:|.|.|||.|:|| |.:.|.||.||:.|:    |||..      .|.|.|.|
 Worm   753 LILVLDKGIILERGNHKEL-LAQQGTYASMWEAQI----AEQRA------KSIELGEE 799

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:292803 52/240 (22%)
ABC_membrane 255..530 CDD:279056 151/275 (55%)
ATM1 314..811 CDD:227590 290/496 (58%)
ABCC_ATM1_transporter 576..812 CDD:213220 136/235 (58%)
hmt-1NP_001022812.1 ABC_membrane 231..504 CDD:294371 151/275 (55%)
ATM1 289..782 CDD:227590 288/493 (58%)
ABCC_ATM1_transporter 550..785 CDD:213220 136/235 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166771
Domainoid 1 1.000 313 1.000 Domainoid score I705
eggNOG 1 0.900 - - E1_COG5265
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11375
Inparanoid 1 1.050 657 1.000 Inparanoid score I408
Isobase 1 0.950 - 0 Normalized mean entropy S1124
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D248727at2759
OrthoFinder 1 1.000 - - FOG0004593
OrthoInspector 1 1.000 - - oto19451
orthoMCL 1 0.900 - - OOG6_100761
Panther 1 1.100 - - LDO PTHR24221
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3271
SonicParanoid 1 1.000 - - X3206
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

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