DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmt-1 and hmt-1

DIOPT Version :10

Sequence 1:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_001022812.1 Gene:hmt-1 / 176540 WormBaseID:WBGene00001815 Length:801 Species:Caenorhabditis elegans


Alignment Length:838 Identity:382/838 - (45%)
Similarity:522/838 - (62%) Gaps:84/838 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VGPA--------VYGGFLLLFGSIQLLM---------YRKYATRITDPTQISKSRL-FAMQLFLL 73
            :||:        || .|.::...|.|.:         ||    |:||....|.|:| .:..|.:.
 Worm    18 IGPSCNKIISFGVY-TFFIVVNFIVLCIPNSNSANNNYR----RMTDDDASSTSKLTISKILSIC 77

  Fly    74 LLLPVL--ALLRFLMNARIYPDSAVYGYMIFSTCV-VCFSYPFSICLILKERYYQLPSMPTRGHG 135
            .:..|:  ::..|......:|    |.:::.:.|| ..|.:..|:|...|.|  ..||.|.    
 Worm    78 TIFAVICQSIFYFCFTFYFHP----YTHLLLAFCVSKLFFWILSLCSFSKWR--NQPSTPI---- 132

  Fly   136 LVLLLFWTLAFINESLAFIN-LRHEDWWFHLK-TNKDQIEMGLFVTRFLCSLLIF----VLGLKA 194
                   :|||...:...|: :...||..:.: |:|::.::..::.......::|    |.||  
 Worm   133 -------SLAFAFSAALLIHCIPLTDWKKYFEPTSKNRGDLTFYIIELALVTVVFFFTIVTGL-- 188

  Fly   195 PGIMAPYNPHQRLDNDTANESQGNVQTGSAFRNGWRKLRTVFPYLWPKKNIALQIAVIVCIILLL 259
                  :|            ..|.....||:.|..:|:.||.||:||.|:|:||:.|:.|:.||:
 Worm   189 ------FN------------FSGCSSRESAWNNLSKKVVTVAPYIWPTKSISLQLRVVFCLFLLI 235

  Fly   260 AGRVIKLFLPIYRKKLVDSLTIAPIVFRWDFVLIYVALSFLQGGGTGSMGLF-NNLRTFLWIRVQ 323
            .||:|.:.|||..|.:||.|. .|..|::..:.:...|.|||  |.|:||.| |.:||:|||.:|
 Worm   236 IGRLINVSLPILSKWIVDELA-TPDTFQYSLLFLATFLKFLQ--GNGAMGGFLNTVRTYLWIPIQ 297

  Fly   324 QYTTREIEIELFRHLHQLSLRWHLQRKTGEVLRVMDRGTDSINNLLNYIVFSIAPTILDLLVAVA 388
            ||||||:|:|||:|||.|||||||.||||:|||||||||.|:||:||||:|::.|||.|:::||.
 Worm   298 QYTTRELEVELFKHLHSLSLRWHLSRKTGQVLRVMDRGTSSVNNILNYILFNVVPTIADIVIAVI 362

  Fly   389 YFVYAFNWWFGLIVFLTMFLYIASTIAITEWRTKYQRRMNLADNEQRARSVDSLLNFETVKYYGA 453
            :|..|||.:||||||.||.||:..||:||||||:|.|..|..||...|.:.|||:|:|||||||.
 Worm   363 FFFSAFNAYFGLIVFGTMALYLTVTISITEWRTQYIREANEKDNATSAIATDSLINYETVKYYGN 427

  Fly   454 EHYEVDCYREAILKYQKEEFLSMLTLNMLNTAQNIILCLGLLAGSLLCVYLVVHHQTLTVGDFVL 518
            |.:||:.::.||..||..|:.:..:|..||..||.|:.:|::.||:..||::||.:||||||:||
 Worm   428 EEFEVNRFKNAIESYQVTEWKTQASLAFLNCLQNAIIGIGMIGGSVFVVYMIVHEKTLTVGDYVL 492

  Fly   519 FSTYLMELYMPLNWFGTYYRAIQKNFVDMENMFDLLKEEEEIVDAPGCSPLLTAGGGIEFSNVTF 583
            |:|||::||.|||:|||.||.|||.||||||||||:.:|.|:.|.|...|.....|.|...|:||
 Worm   493 FTTYLLQLYTPLNFFGTIYRVIQKAFVDMENMFDLMNDEVEVKDLPHALPYTDPRGTISVKNLTF 557

  Fly   584 GYSPEKIVLRNVSFTVPAGKTVAIVGPSGAGKSTIMRLLFRFYDVQTGAILIDGQNIKLVQQQSL 648
            .|:....|::|:||.:..|:|||:||.||:||||::|||||.::...|:|..||.:::.....||
 Worm   558 EYNTGLPVIKNISFEIGNGQTVALVGSSGSGKSTLIRLLFRLFESTEGSIEFDGIDVRNYTMHSL 622

  Fly   649 RKAIGVVPQDTVLFNNTIFYNIEYAKLGASDEAVYEAARAADIHERILGFPEKYETKVGERGLRL 713
            |:.||:|||||||||:||.|||.:.:..||||.|.|||:||.|||:|...||.|.|.||||||:|
 Worm   623 RQQIGIVPQDTVLFNDTIMYNIRFGRPDASDEEVIEAAKAAMIHEKITSLPEGYATMVGERGLKL 687

  Fly   714 SGGEKQRVAIARTLLKAPIIVLLDEATSALDTHTERNIQAALARVCANRTTIIVAHRLSTIIHAD 778
            |||||||||||||:||.|..:.||||||||||.|||.||..|.::|.:||.::|||||||:::||
 Worm   688 SGGEKQRVAIARTILKKPQFIFLDEATSALDTPTERAIQKCLEKLCKSRTGVVVAHRLSTVVNAD 752

  Fly   779 EILVLQQGSIAERGRHEELVLREDGIYADMWQQQLKNLDAEQSGGSDNGDASAESGSE 836
            .||||.:|.|.|||.|:|| |.:.|.||.||:.|:    |||..      .|.|.|.|
 Worm   753 LILVLDKGIILERGNHKEL-LAQQGTYASMWEAQI----AEQRA------KSIELGEE 799

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:465049 52/240 (22%)
ATM1 222..821 CDD:444078 333/599 (56%)
hmt-1NP_001022812.1 ATM1 213..791 CDD:444078 328/585 (56%)

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