DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmt-1 and abtm-1

DIOPT Version :9

Sequence 1:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_001021830.1 Gene:abtm-1 / 171807 WormBaseID:WBGene00022281 Length:704 Species:Caenorhabditis elegans


Alignment Length:622 Identity:243/622 - (39%)
Similarity:374/622 - (60%) Gaps:13/622 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 NGWRKLRTVFPYLWPKKNIALQIAVIVCIILLLAGRVIKLFLPIYRKKLVDSLT-IAPIVFRWDF 290
            :|::.::.:..::|||....::..|:|.:.||:|.::..:.:|...:.:|:... .||...:..|
 Worm    76 SGYQLVQRLLKFVWPKDKPEIKRRVLVALCLLIAAKLANVSVPFLLRDIVNYYNGKAPEFLKLTF 140

  Fly   291 -----VLIY---VALSFLQGGGTGSMGLFNNLRTFLWIRVQQYTTREIEIELFRHLHQLSLRWHL 347
                 ..|:   :|.....|....:..|||.||..::.:|.|.:.|.|...:|.|||.|.|.:||
 Worm   141 DGTPSQTIFTAGIATCIAYGIARATASLFNELRNAVFAKVAQNSIRSISRSIFLHLHSLDLSFHL 205

  Fly   348 QRKTGEVLRVMDRGTDSINNLLNYIVFSIAPTILDLLVAVAYFVYAFNWWFGLIVFLTMFLYIAS 412
            .|:||.:.:.:||||..::.:|:.::|::.||.:::.:..|.|.......|..:...::.:|..:
 Worm   206 NRQTGALSKAIDRGTRGMSFVLSSLIFNLIPTAVEIGMVSALFTGTLGPEFAYMTMGSIGMYGIA 270

  Fly   413 TIAITEWRTKYQRRMNLADNEQRARSVDSLLNFETVKYYGAEHYEVDCYREAILKYQKEEFLSML 477
            |:.:|:||||::.:||.|||:...:::|||:|:|||||:..|.:|.|.|...:.||:.....:..
 Worm   271 TLGVTKWRTKFRHQMNQADNDAGNKAIDSLINYETVKYFNNEKFEADRYDHFLKKYEGASLKTTS 335

  Fly   478 TLNMLNTAQNIILCLGLLAGSLLCVYLVVHHQTLTVGDFVLFSTYLMELYMPLNWFGTYYRAIQK 542
            :|.:||..||.|.. |.|.|.:......:....||:||.:|.:|.|.:|.:|||:.|:.||.:::
 Worm   336 SLALLNFTQNAIFS-GALIGVMCMAGTRIAAGDLTIGDLILANTLLFQLSIPLNFLGSVYREVRQ 399

  Fly   543 NFVDMENMFDLLKEEEEIVDAPGCSPLLTAGGGI--EFSNVTFGYSPEKIVLRNVSFTVPAGKTV 605
            ..|||..||.||..:.:||:|.....|......|  :|.||.|||.|||.:|:.:...:|.||.|
 Worm   400 GLVDMNQMFSLLTLKPKIVEAADAKRLEIVDNDISLKFENVHFGYLPEKPILKGLDLEIPVGKKV 464

  Fly   606 AIVGPSGAGKSTIMRLLFRFYDVQTGAILIDGQNIKLVQQQSLRKAIGVVPQDTVLFNNTIFYNI 670
            ||||.||:|||||:|||:|.||.::|.:.|:|...:.:...|||::|.:||||:|||::|||||:
 Worm   465 AIVGGSGSGKSTIVRLLYRLYDTESGNVRINGLETRDLTLDSLRQSISIVPQDSVLFHDTIFYNL 529

  Fly   671 EYAKLGASDEAVYEAARAADIHERILGFPEKYETKVGERGLRLSGGEKQRVAIARTLLKAPIIVL 735
            .|.:..||.|.||:||:.||:||.:|..|..|||.||||||:|||||||||||||.:||....|:
 Worm   530 AYGRPSASMEEVYQAAKLADLHESVLAMPNGYETLVGERGLKLSGGEKQRVAIARAILKNAPFVI 594

  Fly   736 LDEATSALDTHTERNIQAALARVCANRTTIIVAHRLSTIIHADEILVLQQGSIAERGRHEELVLR 800
            .|||||:||..||.||..||......||::.:||||:||:.||.|.|||.|.:||:|.|.:| |.
 Worm   595 YDEATSSLDAITESNIMKALKGAVEKRTSLFIAHRLATIVDADIIYVLQDGKVAEKGSHFDL-LA 658

  Fly   801 EDGIYADMWQQQLKNLDAEQSGGSDNGDASAESGSEK 837
            .||:||.:|:.|..:..|.:....::.|...|...:|
 Worm   659 VDGLYAQLWKSQNIHGVAPKKSKEEDDDLMLELDLDK 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:292803 1/13 (8%)
ABC_membrane 255..530 CDD:279056 86/283 (30%)
ATM1 314..811 CDD:227590 218/498 (44%)
ABCC_ATM1_transporter 576..812 CDD:213220 129/237 (54%)
abtm-1NP_001021830.1 ABC_membrane 104..387 CDD:294371 86/283 (30%)
ATM1 172..667 CDD:227590 217/496 (44%)
P-loop_NTPase 437..670 CDD:304359 128/233 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5265
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248727at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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