DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmt-1 and abcb6b

DIOPT Version :9

Sequence 1:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster
Sequence 2:XP_021334538.1 Gene:abcb6b / 100004801 ZFINID:ZDB-GENE-070912-584 Length:683 Species:Danio rerio


Alignment Length:619 Identity:363/619 - (58%)
Similarity:465/619 - (75%) Gaps:14/619 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 TANESQGNVQTGSAFRNGW----RKLRTVFPYLWPKKNIALQIAVIVCIILLLAGRVIKLFLPIY 271
            |.:|..|||:..|. |:.|    ||:..:.||:||:.::.||:.||:|:.||...|||.:|:|||
Zfish    63 TEHERDGNVEQISR-RSAWQDFRRKVCLLVPYMWPRGSVWLQVLVILCVGLLGLERVINVFVPIY 126

  Fly   272 RKKLVDSLTIAPIVFRWD----FVLIYVALSFLQGGGTGSMGLFNNLRTFLWIRVQQYTTREIEI 332
            .:.:|:.|:   .:..|.    .|.:||.|.|.||||.|:.|..:|||:|||..|||||:|.:::
Zfish   127 SRNIVNQLS---AMENWRTLAITVCVYVLLKFFQGGGVGTSGFVSNLRSFLWTHVQQYTSRVVQV 188

  Fly   333 ELFRHLHQLSLRWHLQRKTGEVLRVMDRGTDSINNLLNYIVFSIAPTILDLLVAVAYFVYAFNWW 397
            .||.|||.|||||||.|:||:|||.:||||.|:||||:||||||.|||.|:::|:.|||..|:.|
Zfish   189 RLFAHLHGLSLRWHLGRRTGDVLRSIDRGTSSVNNLLSYIVFSIVPTIADIVIAIIYFVTYFSAW 253

  Fly   398 FGLIVFLTMFLYIASTIAITEWRTKYQRRMNLADNEQRARSVDSLLNFETVKYYGAEHYEVDCYR 462
            ||||||:.||||:..||.||||||||:|.||..||..::::|||||||||||||.:|.:||..:.
Zfish   254 FGLIVFICMFLYLTLTIIITEWRTKYRREMNTQDNNAKSKAVDSLLNFETVKYYNSEGFEVRRFE 318

  Fly   463 EAILKYQKEEFLSMLTLNMLNTAQNIILCLGLLAGSLLCVYLVVHHQTLTVGDFVLFSTYLMELY 527
            :||||||..|:.:..:|.:||..||:|:.||||||||||.|.|...: ..|||:|||.||:::||
Zfish   319 DAILKYQACEWKTNASLALLNQTQNLIIGLGLLAGSLLCAYYVTVDK-FQVGDYVLFGTYIVQLY 382

  Fly   528 MPLNWFGTYYRAIQKNFVDMENMFDLLKEEEEIVDAPGCSPLLTAGGGIEFSNVTFGYSPEKIVL 592
            .||||||||||.||..|||||:|||||.||:|:.|......|....|.::|.||.|.|:..|.:|
Zfish   383 TPLNWFGTYYRMIQSAFVDMESMFDLLTEEKEVKDTVNAGDLSFTKGRVDFKNVCFSYTAGKEIL 447

  Fly   593 RNVSFTVPAGKTVAIVGPSGAGKSTIMRLLFRFYDVQTGAILIDGQNIKLVQQQSLRKAIGVVPQ 657
            .:|||||..|:|.|:|||||:|||||:||||||||||:|.||||||:|..|:|.|||..||||||
Zfish   448 SDVSFTVMPGQTFALVGPSGSGKSTIIRLLFRFYDVQSGCILIDGQDIAKVRQNSLRSYIGVVPQ 512

  Fly   658 DTVLFNNTIFYNIEYAKLGASDEAVYEAARAADIHERILGFPEKYETKVGERGLRLSGGEKQRVA 722
            ||||||:.|..||.|.::.|||:.|.|||.|||||::||..|:.|:|:||||||:||||||||||
Zfish   513 DTVLFNDNIRENIRYGRISASDQEVEEAAVAADIHDKILSLPDGYDTEVGERGLKLSGGEKQRVA 577

  Fly   723 IARTLLKAPIIVLLDEATSALDTHTERNIQAALARVCANRTTIIVAHRLSTIIHADEILVLQQGS 787
            ||||:||:|.|:||||||||||:.|||||||:||:||||.||::||||||||:.:|:||||..|.
Zfish   578 IARTILKSPRIILLDEATSALDSQTERNIQASLAKVCANHTTLVVAHRLSTIVSSDQILVLHDGR 642

  Fly   788 IAERGRHEELVLREDGIYADMWQQQLKNLDAEQS 821
            |||:|||||| |.:.|:||.||.:|.:..::|.|
Zfish   643 IAEQGRHEEL-LAKGGLYAAMWLKQQQTPESEVS 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:292803 12/33 (36%)
ABC_membrane 255..530 CDD:279056 154/278 (55%)
ATM1 314..811 CDD:227590 317/496 (64%)
ABCC_ATM1_transporter 576..812 CDD:213220 159/235 (68%)
abcb6bXP_021334538.1 MTABC_N <64..96 CDD:318426 11/32 (34%)
ATM1 170..665 CDD:227590 317/496 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595309
Domainoid 1 1.000 314 1.000 Domainoid score I1261
eggNOG 1 0.900 - - E1_COG5265
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 837 1.000 Inparanoid score I431
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D248727at2759
OrthoFinder 1 1.000 - - FOG0004593
OrthoInspector 1 1.000 - - otm25915
orthoMCL 1 0.900 - - OOG6_100761
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3271
SonicParanoid 1 1.000 - - X3206
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.840

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