DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-d and vtg7

DIOPT Version :9

Sequence 1:NP_732076.1 Gene:cv-d / 41921 FlyBaseID:FBgn0265048 Length:1470 Species:Drosophila melanogaster
Sequence 2:NP_001096141.1 Gene:vtg7 / 559856 ZFINID:ZDB-GENE-001201-6 Length:1358 Species:Danio rerio


Alignment Length:1126 Identity:208/1126 - (18%)
Similarity:380/1126 - (33%) Gaps:321/1126 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NKQMLYEYEGNVLVGAKPQDEGHQAPPTTGWIVRGKLTLQRQSELVLAAALVIDDVTLNNSGEKF 92
            :|..:|:||. :|:|..||:...:|    |..|..|:.|...:|......| :|.:....:|   
Zfish    27 DKTYVYKYEA-LLLGGLPQEGLARA----GIKVSSKVLLSAMTENTYLMKL-MDPLLYEYAG--- 82

  Fly    93 LQNKEMYPPYKPFKIALT-----------KDGAISHVVFKEGDPIWSMNFKRAIASVLQFQMKSS 146
            ...|:.:.|......||.           .:|.:..|....|.....||..|.|.::||..:|::
Zfish    83 TWPKDPFVPATKLTSALAAQLQIPIKFEYANGVVGKVFAPAGVSPTVMNLYRGILNILQLNLKTT 147

  Fly   147 -GAFVVDELGIHGTCRTEYFVSN--RTNYISIRKTPEVKTCK---------PYSEAVH--TTRSN 197
             ..:.:.|.|..|.|||.|.::.  :||:|.:.|:.::..|:         .|:|:..  |.|..
Zfish   148 QNIYELQEAGAQGVCRTHYVINEDPKTNHIIVTKSKDLSHCQERIMKDVGLAYTESCPECTERVK 212

  Fly   198 VPPNTCEFDH-----QKSVIIGN---EAIYGMSPHNETGYYLSMAHAKGTTLIHTFEST------ 248
            ....|..:::     ....:|..   |.:|..||.||. :..:|..||.|......|.|      
Zfish   213 SLIETATYNYIMKPADNGALIAEATVEEVYQFSPFNEI-HGAAMMEAKQTLAFVEIEKTPVVPIK 276

  Fly   249 ------GEAQF-INSELLLNFLNETPIDNPIDIETSMAAEPSNLELQRLDPNDPTGGRSPQQQET 306
                  |..|: ..:|:|     :|||                 :|.::.               
Zfish   277 ADYMPRGSLQYEFATEIL-----QTPI-----------------QLMKIS--------------- 304

  Fly   307 LIAQAGTLLDSLAEALETTEFKFSEPYDSTLSD-------VIKLLSEMDFDSLTKLYREVDIGTS 364
                     |:.|:.:|......:...|....|       :::||.....|....::.:......
Zfish   305 ---------DATAQIVEVLTHLVANNKDMVHDDAPLKFVQLVQLLRLSTLDKFEAIWAQFKNKPV 360

  Fly   365 YRQETIRNIFHEIIPRIGTKASV-FLTHHLVLNKLTKPQIAVQLLIPMPFHIFELSAELVQKC-- 426
            ||:..:     :.:|.:||...: |:....:..:.|.|:....|::.:.....:|  |.:|..  
Zfish   361 YRRWLL-----DALPAVGTPVIIKFIKEKFLAGEFTTPEFIQTLVVALQMVTADL--ETIQMTYS 418

  Fly   427 ----EDFLNIGPDRPDVRQAAILSFATLIHNVYVAKGIDKEKFEEYVQKYFNAYLSDRDFDQKML 487
                |.|..|    |.:|:..:|.:.:||....||......:..:.:.:.....:|..|..:..|
Zfish   419 LATHEKFTTI----PALREVVMLGYGSLIAKHCVAVPSCPAELLKPIHEITAEAISKNDIPEITL 479

  Fly   488 YLQGLNNLQLGNVANYLEPIVQDPNEHEDLKFQAAWTTLA-----------------LADRRAER 535
            .|:.:.|  .|:.:: |:||         :|......|.|                 :|.:..:.
Zfish   480 ALKVMGN--AGHPSS-LKPI---------MKLLPGLRTAANALPIKVQVDAILALRNIAKKEPKL 532

  Fly   536 IYEVYWPIFESRNASLELRVAAVTLLLISNPTAARLISIHRIIQSETDPHMINYYRTTVTSISET 600
            :..:...:...|....|:|:.|..:|..:.|:||.:.|:...::.|.:.|:.::..:.:.|::..
Zfish   533 VQPIALQLVLDRALHPEVRMVACIVLFEAKPSAALVSSLAGALRIEPNMHVASFAYSHIKSLTRI 597

  Fly   601 TYPCYQHL----RRLLSYMHRHLPQKPESRYWVTGNYIFDYRDSKFGIGAMLQVFLVGDPKSDMP 661
            |.|....:    ...:..|:|.|.:   ..|..:..:..||..:...|||....:::.|..:.:|
Zfish   598 TAPDMASVAGAANVAIKLMNRKLDR---LNYRYSRAFHMDYYHTPLMIGAAGSAYMINDAATILP 659

  Fly   662 VVAFFKFDTEALGKFTGQLALYIKARGLPDTILNKMQSRNGSDPFT--FKSIKAL---------- 714
            .....|..|...|.....:...::..|:.:.:|....:....|..|  .:::|||          
Zfish   660 RAIVAKARTYLAGAAADVIEFGVRTGGIHEALLKSSAADESVDRITKIKRTLKALANWKALPTDR 724

  Fly   715 -LAMLQAPIINSKDLHLEF---------------------------------------ILQMEGK 739
             ||.....:...:..::.|                                       :|..|.:
Zfish   725 PLASAYVKVFGQEVAYVNFDKTIIEEAIPMVSGPKPRALLKEALKALQEGVAFQYAKPLLAAEVR 789

  Fly   740 TVL----------SYY--------LNQRMFRQLTYDNILERM--QQIIRTDSHINMQTVRWPFMN 784
            .:|          |.|        :|.:..........||.|  .|:.|||  :..|....|.:.
Zfish   790 RILPTAVGVPMEFSLYTAAVAAASVNVQATITPALPEKLESMTLDQLKRTD--VQFQAEARPSVA 852

  Fly   785 RYTVPTVLGTSSDVLLQTTVLTSLRGNITE------QRNSPITK-----HTLEID-------ARY 831
            ..|. .|:|.:: ..:|..|:.  ||.|..      ...:.|.|     .||.::       |.:
Zfish   853 LQTF-AVMGVNT-AFIQAAVMA--RGKIRTIAPGKVAARADILKGNYKVETLPVELPEHIASASF 913

  Fly   832 SSYASVRSRSYNPFLNLDHEINREQGFLIYIPFSSELHLNESGSKCRRYSFSRPQNLTSG-LSFK 895
            .:.|.||:..       ||...|.      ||...||.|..|            |..::| ||.:
Zfish   914 ETLAVVRNIE-------DHSAERS------IPLVPELSLQNS------------QTSSAGDLSTE 953

  Fly   896 SRAVTKTRGLITKTAAAPFEEIMVPEGRNDVVQLFSYPMTDLGVRLSMTTNLNELIKYRGMLLKS 960
            ..:....|      |:|||:..:          .:|.|...:       ....|:..|....:|:
Zfish   954 MSSAASVR------ASAPFDRTL----------CYSCPYIQV-------KGCVEVHSYNAAFIKN 995

  Fly   961 EFTENGFSGNMVVNALMYIFG 981
                         :.|.||.|
Zfish   996 -------------STLFYIIG 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-dNP_732076.1 LPD_N 28..589 CDD:214755 123/637 (19%)
DUF1943 632..>813 CDD:286281 42/252 (17%)
VWD 1277..1435 CDD:295339
vtg7NP_001096141.1 Vitellogenin_N 24..592 CDD:279663 123/643 (19%)
DUF1943 626..917 CDD:286281 48/296 (16%)
DUF1944 1164..1328 CDD:286284
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581662
Domainoid 1 1.000 54 1.000 Domainoid score I11190
eggNOG 1 0.900 - - E1_KOG4338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26552
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23345
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.840

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