DRSC/TRiP Functional Genomics Resources

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Protein Alignment cv-d and vtg6

DIOPT Version :9

Sequence 1:NP_732076.1 Gene:cv-d / 41921 FlyBaseID:FBgn0265048 Length:1470 Species:Drosophila melanogaster
Sequence 2:NP_001116082.3 Gene:vtg6 / 559229 ZFINID:ZDB-GENE-001201-5 Length:1374 Species:Danio rerio


Alignment Length:1539 Identity:279/1539 - (18%)
Similarity:508/1539 - (33%) Gaps:456/1539 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SVFVYLFLIFDAGHAFSII---GLNKQMLYEYEGNVLVGAKPQDEGHQAPPTTGWIVRGKLTLQR 68
            :|.:.|.:...|...|:::   ..:|..:|:||. :|:|..||:...:|    |..|..|:.|..
Zfish    14 AVVLALTVALVASQQFNLVPEFAHDKTYVYKYEA-LLLGGLPQEGLARA----GIKVSSKVRLSA 73

  Fly    69 QSELVLAAALVIDDVTLNNSGEKFLQNKEMYPPYKPFKIALT-----------KDGAISHVVFKE 122
            .:|......| :|.:....:|   ...|:.:.|......||.           .:|.:..|....
Zfish    74 MTENTYLMKL-MDPLLYEYAG---TWPKDSFVPATKLTSALAAQLQIPIKFEYANGVVGKVFAPA 134

  Fly   123 GDPIWSMNFKRAIASVLQFQM-KSSGAFVVDELGIHGTCRTEYFVSN--RTNYISIRKTPEVKTC 184
            |.....||..|.|.::||..: |:...:.:.|.|..|.|||.|.::.  :||:|.:.|:.::..|
Zfish   135 GVSPTVMNLHRGILNILQLNLKKTQNIYELQEAGAQGVCRTHYVINEDPKTNHIIVTKSKDLSHC 199

  Fly   185 K---------PYSE--AVHTTRSNVPPNTCEFDH-----QKSVIIGN---EAIYGMSPHNETGYY 230
            :         .|:|  |..|.|......|..:::     ....:|..   |.:|..||.||. :.
Zfish   200 QERIMKDVGLAYTERCAECTKRVKSLIETATYNYIMKPADNGALIAEATVEEVYQFSPFNEI-HG 263

  Fly   231 LSMAHAKGTTLIHTFEST------------GEAQF-INSELLLNFLNETPIDNPIDIETSMAAEP 282
            .:|..||.|......|.|            |..|: ..||:|     :|||              
Zfish   264 AAMMEAKQTLAFVEIEKTPVVPIKADYMPRGSLQYEFASEIL-----QTPI-------------- 309

  Fly   283 SNLELQRLDPNDPTGGRSPQQQETLIAQAGTLLDSLAE-----ALETTEFKFSEPYDSTLSDVIK 342
               :|.::..       :|       ||...:|..|.|     ..:...|||.:        :::
Zfish   310 ---QLMKIKD-------AP-------AQIVEVLKHLVENNKDMVHDDAPFKFVQ--------LVQ 349

  Fly   343 LLSEMDFDSLTKLYREVDIGTSYRQETIRNIFHEIIPRIGTKASV-FLTHHLVLNKLTKPQ---- 402
            ||..:..|.:..::.:......||:..:     :.:|.:||...: |:....:..:.|.|:    
Zfish   350 LLRVVTLDKIEAIWSQFKDKPVYRRWLL-----DALPAVGTPVIIKFIKEKFLAGEFTTPEFIQT 409

  Fly   403 --IAVQLLIPMPFHIFELSAELVQKCEDFLNIGPDRPDVRQAAILSFATLIHNVYVAKGIDKEKF 465
              ||:| ::.......:::|.|... |.|::|    |.:|:..:|.:.:||....||......:.
Zfish   410 LVIALQ-MVTADLETIQMTASLAMH-EKFVSI----PALREVVMLGYGSLIAKHCVAVPTCPAEL 468

  Fly   466 EEYVQKYFNAYLSDRDFDQKMLYLQGLNNL--------------QLGNVANYLEPIVQDPNEHED 516
            ...:.:.....:|..|..:..|.|:.:.|.              .|...||.|...||       
Zfish   469 LRPIHETATEAISKNDIPEITLALKVMGNAGHPSSLKPIMKLLPGLRTAANALPVRVQ------- 526

  Fly   517 LKFQAAWTTLALADRRAERIYEVYWPIFESRNASLELRVAAVTLLLISNPTAARLISIHRIIQSE 581
              ..|......:|.:..:.:..|...:...|....|:|:.|..:|..:.|:.|.:.|:...:::|
Zfish   527 --VDAILALRNIAKKEPKLVQPVALQLVLDRALHPEVRMVACIVLFETEPSVALISSLAGALRTE 589

  Fly   582 TDPHMINYYRTTVTSISETTYPCYQHLRRLLSYMHRHLPQKPES-RYWVTGNYIFDYRDSKFGIG 645
            .:.|:.::..:.:.|::..|.|...::....:...:.:..|.:. .|..:..:..||..:...||
Zfish   590 PNMHVASFAYSHIKSLTRITAPDMAYVAGAANVAIKLMNCKLDRLNYRYSRAFQMDYYYTPLMIG 654

  Fly   646 AMLQVFLVGDPKSDMPVVAFFKFDTEALGKFTGQLALYIKARGLPDTILNKMQSRNGSDPFTFKS 710
            |....:::.|..:.:|                  .|:..|||                       
Zfish   655 AAGSAYMINDAATILP------------------RAVVAKAR----------------------- 678

  Fly   711 IKALLAMLQAPIINSKDLHLEFILQMEGKTVLSYYLNQRMFRQLTYDNILERMQQIIRTDSHINM 775
              ..||...|.::       ||.::..|       :|:.:.:....|..::|:.:|.||...:. 
Zfish   679 --TYLAGAAADVV-------EFGVRTGG-------INEALLKSPAADESVDRITKIKRTLKALT- 726

  Fly   776 QTVRWPFMNRYTVPTVLGTSSDVLLQTTVLTSLRGNITEQRNSPITKHTLEIDARYSSYASVRSR 840
                    |...:||                          :.|:.          |:|..|..:
Zfish   727 --------NWKALPT--------------------------DKPLA----------SAYVKVFGQ 747

  Fly   841 SYNPFLNLDHEINREQGFLIYIPFSSELHLNESGSKCRRYSFSRPQNLTSGLSF---KSRAVTKT 902
            .. .::|.|..|..|.     ||.       .:|.|.|.......:.|..|::|   |.....:.
Zfish   748 EV-AYVNFDKTIIEEA-----IPM-------VTGPKPRALLKEALKALQEGVAFQYAKPLLAAEV 799

  Fly   903 RGLITKTAAAPFEEIMVPEGRNDVVQLFSY-----PMTDLGVRLSMTTNLNELIKYRGMLLKS-E 961
            |.::......|.|              ||:     ....:.|:.::|..|.|  |...|..:. :
Zfish   800 RRILPTAVGVPME--------------FSWYTAAVAAASVNVQATITPALPE--KLESMTYEQLK 848

  Fly   962 FTENGFSGNMVVNALMYIF-------GFTQLSSIHLGHDRNFTMLMYNEKNTRIEGNFCAEDVLK 1019
            .|:..|......:..:..|       .|.|.:.:..|..|.........:...::||:..|    
Zfish   849 KTDVQFQAEARPSVALQTFAVMGVNTAFIQAAVMARGKIRTIAPGKVAARADILKGNYKVE---- 909

  Fly  1020 TSDMKGKQIGLTLEHTDHMN----ENHAADALHRWNITLDVLASTKSNWFKLTGQ--VQRNSKDD 1078
                     .|.::..:|:.    |.||        :..::...:......|..|  :|.:...:
Zfish   910 ---------ALPVDLPEHIASASFETHA--------VVRNIEDHSAERSVPLVPQLSLQNSQTSN 957

  Fly  1079 EDDWKA------------------CTKLTYEPLVFTKRPHTLNGDVV---------------FGL 1110
            .:||.:                  |..:.|..:......|:.|...:               ..:
Zfish   958 ANDWSSEMSPDVSVKAPAPFDRTLCYAVPYIEIKGCVEVHSHNAAFIRNSTLFYIIGQHSAHVAV 1022

  Fly  1111 ATEESECPEKGSTVQFAARAGPSEHARAFLRSDK-ISLTDTDFCP---------KEVL----KFS 1161
            |..|....|:   ::|..:.||    ||..|..| |::.|.| .|         :|:|    |.:
Zfish  1023 ARAEGPAVER---LEFEVQVGP----RAAERLVKQINIIDDD-TPEGQAFLLKLREILDTEAKNA 1079

  Fly  1162 PIPTSRYCKRSNFENFTSITQYDMDLKFDNMPAWFELWSNRLDHLVSALSADKVDSLHMSQEINI 1226
            |:.:.   ..|:..|..||:....:..           ||......|:.|:....|..||.....
Zfish  1080 PVSSE---SSSSSRNSRSISSSSSNSN-----------SNSSSSSSSSSSSSSSSSSSMSSSRMS 1130

  Fly  1227 SMQTPQDQFRLAVEVNGVKWRFHQIPFFYKLDSKFDASHELT-----------FDSGLKRSCSVI 1280
            ...|..:.||          :||:        .::.|:|..|           |:...|::..:.
Zfish  1131 KTATIMEPFR----------KFHK--------DRYLAAHSATKDTSSGSAAASFEQMQKKNRFLG 1177

  Fly  1281 NGIVNTFDDYLINLREIAVRPDCLTLLVADCSPLPQIAVFVTPSP-VQGLSTNYGLRVHIGQNYF 1344
            |.|...|   .|..|.:......|...:|        |.|..|:. ||.::::.           
Zfish  1178 NDIPPVF---AIIARAVRADQKLLGYQLA--------AYFDKPTARVQLIASSI----------- 1220

  Fly  1345 NFRARTDNSSLPTDEPVLIYLNQDQTPHNVRKKPYQWPIETSDY 1388
               |..||..:..|..:|       :.|.|..| :.|..|...|
Zfish  1221 ---AENDNMKICADGALL-------SKHKVTAK-FSWGAECKQY 1253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-dNP_732076.1 LPD_N 28..589 CDD:214755 130/632 (21%)
DUF1943 632..>813 CDD:286281 26/180 (14%)
VWD 1277..1435 CDD:295339 23/113 (20%)
vtg6NP_001116082.3 Vitellogenin_N 35..603 CDD:279663 130/641 (20%)
DUF1943 637..928 CDD:286281 67/434 (15%)
DUF1944 1182..1346 CDD:286284 21/105 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581665
Domainoid 1 1.000 54 1.000 Domainoid score I11190
eggNOG 1 0.900 - - E1_KOG4338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D25081at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26552
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23345
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

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