DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-d and vit-3

DIOPT Version :9

Sequence 1:NP_732076.1 Gene:cv-d / 41921 FlyBaseID:FBgn0265048 Length:1470 Species:Drosophila melanogaster
Sequence 2:NP_001367903.1 Gene:vit-3 / 24104675 WormBaseID:WBGene00006927 Length:1603 Species:Caenorhabditis elegans


Alignment Length:1559 Identity:294/1559 - (18%)
Similarity:574/1559 - (36%) Gaps:302/1559 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QMLYEYEGNVLVGAKPQDEGHQAPPTT-----GWIVRGKLTLQRQSELVLAAALVIDDVTLNNSG 89
            :.:|:::|.:|.|.          |||     ..::..:..||...:..:...|:  |:..:.| 
 Worm    29 EYVYKFDGLLLSGL----------PTTFSDASQTLISCRTRLQAVDDRYIHLQLI--DIQYSAS- 80

  Fly    90 EKFLQNKEMYPPYK-----------------PFKIALTKDGAISHVVFKEGDPIWSMNFKRAIAS 137
              .:...|.:|..|                 ||: |..::|.:|.:.|...|..||.|.||:|.:
 Worm    81 --HIPQSEQWPKIKSLEQRELSDELKELLELPFR-AQIRNGLVSEIQFSSEDAEWSKNAKRSILN 142

  Fly   138 VLQFQM-----------------KSSGAFVVDELGIHGTCRTEYFVSNRTNYISIRKTPEVKTCK 185
            :...:.                 |.|..|.|.|..:.|.|...|.:..........|:.....|.
 Worm   143 LFSLRKSAPVDEMSQDQKDMESDKDSLFFNVHEKTMEGDCEVAYTIVQEGEKTIYTKSVNFDKCI 207

  Fly   186 PYSEAVHTTRSNVPPNTCEFDHQKSVIIGNEAIYGMSPHNETGYYLSMAHAKGTTLIHTFESTGE 250
            ...|..:..|.......||.:.|   .:..:.:|..:..||. ...|..|:     |:|....|:
 Worm   208 TRPETAYGLRFGSECKECEKEGQ---FVKPQTVYTYTFKNEK-LQESEVHS-----IYTLNVNGQ 263

  Fly   251 AQFINSEL--LLNFLNETPIDNPI--------DIETSMAAEPSNLELQRLDPNDPTGGRSPQQQE 305
             :.:.||.  .:.|:.|:.|:..|        :|..||..|....:..:.............:.|
 Worm   264 -EVVKSETRSKVTFVEESKINREIKKVSGPKEEIVYSMENEKLIEQFYQQGDQAEVNPFKAIEME 327

  Fly   306 TLIAQAGTLLDSLAEALETTEFKFSEPYDSTLSDVIKLLSEMDFDSLTKLYREVDIGTSYRQETI 370
            ..:.|    ||.:...::..|....|.. ..::..:::......:.|.|::..:   .:..::.:
 Worm   328 QKVEQ----LDEIFRQIQEHEQNTPETV-HLIARAVRMFRMCTIEELKKVHTTI---YTKAEKKV 384

  Fly   371 RNIFHEIIPRIGTKASV-FLTHHLVLNKLTKPQIAVQL-------LIPMPFHIFELSAELVQKCE 427
            :.:....:...|||.:: .|.||.....:| |..|.:|       |.|.. ||.:|..:|.|.  
 Worm   385 QLVIETTLAVAGTKNTIQHLIHHFEKKSIT-PLRAAELLKSVQETLYPSE-HIADLLIQLAQS-- 445

  Fly   428 DFLNIGPDRPDVRQAAILS-------FATLIHNVYVAKGIDKEKFEEYVQKYFNAYLSDRDFDQK 485
               .:......:||:|.|:       ||:...::.:.:...::..|:||:.:...:.:.....:|
 Worm   446 ---PLSEKYEPLRQSAWLAAGSVVRGFASKTQDLPLIRPASRQTKEKYVRVFMQHFRNADSTYEK 507

  Fly   486 MLYLQGLNNLQLGNVANYLEPIVQDPNEHEDLKFQAAWTTLALADRRAERIYEVYWPIFESRNAS 550
            :|.|:.|.|..:......|..::|||.:...::.:|......|.|....:|.:|..|::::|...
 Worm   508 VLALKTLGNAGIDLSVYELVQLIQDPRQPLSIRTEAVDALRLLKDVMPRKIQKVLLPVYKNRQNK 572

  Fly   551 LELRVAAVTLLLISNPTAARLISIHRIIQSETDPHMINYYRTTVTSISETTYPCYQHL----RRL 611
            .|||:||:..::.:.|....|..|...:::|::.|:..:....:...|::|.||||.|    .::
 Worm   573 PELRMAALWRMMHTIPEEPVLAHIVSQMENESNQHVAAFTYNVLRQFSKSTNPCYQQLAVRCSKV 637

  Fly   612 LSYMHRHLPQKPE-SRY---------WVTGNYIFDYRDSKFGIGAMLQVFLVGDPKSDMPVVAFF 666
            |.:. |:.||:.. |.|         |::| ..||:.             .:.:..:.:|.....
 Worm   638 LLFT-RYQPQEQMLSTYSQLPLFNSEWLSG-VQFDFA-------------TIFEKNAFLPKEVQA 687

  Fly   667 KFDTEALG---KFTGQLALYIKARGLPDTILNKMQSRN----GSDPFTFKSIKALLAMLQAPI-- 722
            .|:|...|   |:..|:.  ...:.....||..::..:    .||....:.:::.:.|||..:  
 Worm   688 SFETVFGGNWNKYFAQVG--FSQQNFEQVILKTLEKLSLYGKQSDELRSRRVQSGIQMLQEIVKK 750

  Fly   723 ---------INSKDLHLEFILQMEGKTVLSYYLNQRMFRQLTYDNILER-----------MQQII 767
                     .:|::.|..|.|:.:....:...::..     |.||::|:           :...:
 Worm   751 MNIRPRVQQTDSQNAHAVFYLRYKEMDYIVLPIDME-----TIDNVVEKYVRNGEFDIKSLLTFL 810

  Fly   768 RTDSHINMQTVRWPFMNRYTVPTVLGTSSDVLLQTTVLTSLRGNITEQRNSPITKHTLEIDARYS 832
            ..||...:....:.:.....:||.:|....:..:...:.|:.|.::.:......:..|:|....:
 Worm   811 TNDSKFELHRALFFYEAERRIPTTIGMPLTISGKMPTILSINGKVSIELEKLGARLVLDIVPTVA 875

  Fly   833 SYASVRSRSYNPFLNLDHEINREQGFLIYIP--FSSELHLNESGSKCRRYSFSRPQNLTSGLSFK 895
            :......|.:.|.  ::..:...|...::.|  |.|.:.|.::..:. .:.|..|:|..:.:|..
 Worm   876 TTHVTEMRFWYPV--IEQGVKSLQSARLHTPLRFESTVELKKNTLEI-THKFVVPENKKTTVSVH 937

  Fly   896 SRAVTKTRGLITKTAAAPFEEIMVPEGRNDVVQLFSYPMT---------DLGVRLSMTTNLNELI 951
            :|.|...|  :.|...:.:.|.     ....:....|.|:         ..|:|::...|:....
 Worm   938 TRPVAFIR--VPKNQDSEYVET-----EEKTISHSQYQMSTEEIDRQYETFGLRINAQGNVLSQW 995

  Fly   952 KYRGMLLKS---EFT-EN-----GFSGNMVVNALMYIFGFTQLSSIHLG--HDRNFTMLMYNEKN 1005
            ....:|:..   ||| ||     .|:..:.:..|..    |.||.|...  .::.|.:.....:|
 Worm   996 TLPMVLMTEQDFEFTLENKNRPVEFTARVTIGNLEK----TDLSEIKFDKIFEKEFDLENNESEN 1056

  Fly  1006 TRIEGNFCAEDVLKTSDMKGKQIGLTLEHTDHMNENHAADALHRWNITLDVLASTKSNWFKLTGQ 1070
            .|...:....::......| ..|.|.||....|          .||..|..:........|:...
 Worm  1057 RRQYFHKMIREIQSEQGFK-NLITLKLEAPQQM----------YWNTELRTVCDKWIRMCKVEMD 1110

  Fly  1071 VQRNSKDDED-DWKACTK-LTYEPLV------FTKRPHTLNGDVVFGLATEESECPEKGSTVQFA 1127
            .:|:..:.|: :|...|: |...|.:      ..::||.   :|...|..:...  .|.|.:.|.
 Worm  1111 ARRSPMEHENKEWTLRTELLAARPQMPSSLRQLREQPHR---EVQLALNAKWGS--SKKSEITFN 1170

  Fly  1128 ARAGPSEHARAFLRSDKISLTDTDFCPKEVLKFSPIPTSRY---CKRSNFEN------FTSITQY 1183
            |:...|...:.|||:.:             .::..||....   ..|.|..|      .|..::|
 Worm  1171 AQLEQSTEQKKFLRNIE-------------REYKGIPEYELLIKAARLNQVNVVSEYKLTPESEY 1222

  Fly  1184 DMDLKFDNMPAWFELWS-------NRLDHLVSALSADKVDSLHMSQEINISMQTPQDQFRLAVEV 1241
            .....||.:.| :..|:       |....:|..||.:.:...:|    |:::|||:.:    ||:
 Worm  1223 TFSRIFDLIKA-YNFWTVSEKRVQNEDRRVVLQLSVEPLSRQYM----NMTIQTPEQE----VEL 1278

  Fly  1242 NGVKWRFHQIPFFYKLDSKFDASHELTFDSGLKRSCSVINGIVNTFDDYLINLREIAVRPDCLTL 1306
            ..|:.....:|...: .:.|..:.|.|     ..:|.|....|:|||:.:..    |....|.:|
 Worm  1279 KNVRIPRVVLPTIAR-RAMFQQTWEKT-----GATCKVGQSEVSTFDNVIYR----APLTTCYSL 1333

  Fly  1307 LVADCSPLPQIAVFVTPSPVQGLSTNYGLRVHIGQNYFNFRARTDNSSLPTDEPVLIYLNQDQTP 1371
            :..|||..|:.||               |...|.:|......:.    :..:|.:::..:.|:..
 Worm  1334 VAKDCSEQPRFAV---------------LAKKINKNSEELLVKV----VRREEEIVVKKSDDKFL 1379

  Fly  1372 HNVRKKPYQWPIETSDYDFRVELNEQNILIVECTQLSSTIQFDLYNILNFEIYGVYKHQMCGLC 1435
            ..|.:|... |.|...|:  :|:...|::::....  ..::||.|.:.........::|:||||
 Worm  1380 VKVDEKKVN-PTELEQYN--IEILGDNLIVIRLPH--GEVRFDGYTVKTNMPSVASQNQLCGLC 1438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-dNP_732076.1 LPD_N 28..589 CDD:214755 121/622 (19%)
DUF1943 632..>813 CDD:286281 30/209 (14%)
VWD 1277..1435 CDD:295339 33/157 (21%)
vit-3NP_001367903.1 Vitellogenin_N 24..617 CDD:396081 121/628 (19%)
DUF1943 651..936 CDD:401204 46/308 (15%)
VWD 1300..1454 CDD:214566 37/172 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159768
Domainoid 1 1.000 75 1.000 Domainoid score I5894
eggNOG 1 0.900 - - E1_KOG4338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I3236
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D25081at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14451
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23345
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R17016
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.930

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