DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-d and vit-1

DIOPT Version :9

Sequence 1:NP_732076.1 Gene:cv-d / 41921 FlyBaseID:FBgn0265048 Length:1470 Species:Drosophila melanogaster
Sequence 2:NP_001367671.1 Gene:vit-1 / 181034 WormBaseID:WBGene00006925 Length:1616 Species:Caenorhabditis elegans


Alignment Length:1667 Identity:331/1667 - (19%)
Similarity:596/1667 - (35%) Gaps:480/1667 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 YEYEGNVLVGAKPQDEGHQAPPTTGWIVRGKLTLQRQSELVLAAALVIDD-------VTLNNSGE 90
            |:::|.||.|.          ||..    .:|:..|.|..|...|  :||       |.::.:..
 Worm    32 YKFDGLVLSGL----------PTAS----SELSQSRFSARVRIQA--VDDRHIHLQLVNIHMAAS 80

  Fly    91 KF-----------LQNKEMYPPYK-----PFKIALTKDGAISHVVFKEGDPIWSMNFKRAIASVL 139
            ..           ::.:|:...||     |.:..| ::|.|:.:.|.:.|..||.|.|||:.:::
 Worm    81 HLPESEQIPSLNSMEQRELSEEYKQMLKLPLRAQL-RNGLIAELQFDKEDAEWSKNMKRAVVNMI 144

  Fly   140 QF--------------------QMKSSGAFVVDELGIHGTCRTEYFVSNRTNYISIRKTPEVKTC 184
            .|                    |.:.:.:|..:|..:.|.|:..|.|........|.|:.....|
 Worm   145 SFNPIAPRNEIEKIESSYDKEEQSEENTSFFTNEKTLEGDCQVAYTVIREQKKTIITKSINFDKC 209

  Fly   185 KPYSEAVHTTRSNVPPNTCEFDHQKSVIIGNEAIYGMSPHNE---------------TGYYLSMA 234
            ...||..:..|.:.....||.|   :|:|..:.:|.....||               .|..:...
 Worm   210 TERSEIAYGLRYSSECPECEKD---TVLIRPQTVYTYILENEELKESEVRSLYTVNVNGQEVMKT 271

  Fly   235 HAKGTTLI---HTFES-----TGEAQFIN-----SELLLNF-----------LNETPIDNPIDIE 275
            ..:...::   |:.:|     .||.:.|.     .:|:.:|           ..:.|:|..:.:.
 Worm   272 ETRSKLVLEENHSIKSHIEKVNGEKESIIYSSRWEQLVEDFFKNGDKAEFAPFEKFPLDKKMHLI 336

  Fly   276 TSMAAEPSNLELQRLDPNDPTGGRSPQQQETLIAQAGTLLDSLAEALETTEF--KFSEPYDSTLS 338
            .::..     ::|.::.|.|                           ||:.|  :....:.:|.:
 Worm   337 KTITE-----QIQEVENNIP---------------------------ETSHFLARLVRIFRTTST 369

  Fly   339 DVIKLLSEMDFDSLTKLYREVDIGTSYRQETIRNIFHEIIPRIGTKASV--FLTHHLVLNKLTKP 401
            ..:|.:.|       .||.:.|       :.|:::....:...|||.::  .|.|  :.|:...|
 Worm   370 SQLKEIHE-------TLYVKAD-------KKIQSLMEHALAIAGTKNTIQHILVH--IENEDIVP 418

  Fly   402 QIAVQLLIPM---PFHIFELSAELVQKCEDFLNIGPDRPDVRQAAILSFATLIHNVYVAKGI--- 460
            ..|.|||..:   ||....::..|::..|.  .:..:...|||:|.|:..:::..:...|.|   
 Worm   419 LEAAQLLKSIQETPFPSQTIAEALIKFAES--RVSKNNQVVRQSAWLAAGSVVRGIVDYKNIRPL 481

  Fly   461 ---DKEKF-EEYVQKYFNAYLSDRDFDQKMLYLQGLNNLQLGNVANYLEPIVQDPNEHEDLKFQA 521
               ||.:. |::::.:...|.......:|:|.|:.:.|..|....|.|..|:.|..:...::.:|
 Worm   482 VREDKRELKEKFLRVFMQQYKDAETTYEKILALKSIGNAGLDISVNQLNEIIVDKRQLLPVRKEA 546

  Fly   522 AWTTLALADRRAERIYEVYWPIFESRNASLELRVAAVTLLLISNPTAARLISIHRIIQSETDPHM 586
            ......|.|....:|.:|..||:::|....|:|:.|:..::.:.|..:.|:.:...::.||:..:
 Worm   547 IDALRLLKDTMPRKIQKVLLPIYKNRQYEPEIRMLALWRMMHTRPEESLLVQVVSQMEKETNQQV 611

  Fly   587 INYYRTTVTSISETTYPCYQHL----RRLLSYMHRHLPQKPESRYWVTGNY----IF---DYRDS 640
            .......:...:::|.||||.:    .::||:. |:.||:    ..:..:|    :|   .:..:
 Worm   612 AALTHQMIR
HFAKSTNPCYQRVAIVCSKVLSFT-RYQPQE----QMIASSYAQLPLFLQNSFSGA 671

  Fly   641 KFGIGAMLQ--VFLVGDPKSDMPVV---------AFFKFDTEALGKFTGQLAL------------ 682
            :|...|:.:  .||:.|..:.:..|         |...|..:.:.|:. |:||            
 Worm   672 QFDFAAIFEKNSFLLKDLHASLDAVFGGNWNKYFAQIGFSQQHMDKYV-QMALEKLESIEKESTT 735

  Fly   683 YIKARGLPD--TILN----KMQSRNGSDPFTFKSIKALLAMLQAPIINSKDLHLEFI---LQMEG 738
            .::.|.:..  |:|.    ||..|  :.|..:.. |...||:   .:..||:....:   .|:..
 Worm   736 VVRGRRIQTGITLLKELALKMNIR--ARPANYNE-KDAFAMV---YLRYKDMDYAILPVDTQLIE 794

  Fly   739 KTVLSYYLNQRMFRQLTYDNILERMQQIIRTDSHINM----------QTVRWPFMNRYTVPTVLG 793
            |.:..|..|.:    :.:..|...:.|....::|...          .|:..|.:....:|||..
 Worm   795 KLIEKYISNGK----VQFSEIRRLLNQEHEFETHHAAYFYEAIRKFPTTLGLPLIVSGKIPTVFS 855

  Fly   794 TSSDVLLQTTVLTSLRGNITEQRNSPITKHTLEI-------DARYSSYASVRSRSYNPFLNLDHE 851
            ......|.... |.||..: |.|.|....|..|:       :....|..||  |:|.| :.:...
 Worm   856 AEGQFSLGLEE-TELRLTV-EARPSVAATHVYEMRMFTPLFEQGVKSVQSV--RAYTP-IKIQAV 915

  Fly   852 INREQGFLIYIPFSSELHLNESGSKCRRYSFSRPQNLTSGLSFKSRAVTKTR--GLITKTAAAPF 914
            :..::.|.|.                  |....|:|..|.:|..:|.|...|  | .:|......
 Worm   916 VGMKRNFEIV------------------YKVVVPENQKSIISLTTRPVVFLRFPG-FSKFEYIEA 961

  Fly   915 EE--IMVPEGR---NDVVQLFSYPMTDLGVRLSMTTN-LNELIKYRGMLLKSEF---TEN----- 965
            ||  ::||:.:   .::.::|::    ||:.:|...| ||:......:|.:.:|   .||     
 Worm   962 EERTVVVPQWQQKTQEIEKVFNF----LGLEVSTRGNILNQHTLENWLLAEQDFEVSVENKYRPA 1022

  Fly   966 GFSGNMVVNALMYIFGFTQLSSIHLGHDRNFTMLMYNEKNTRIEGNFCAEDVLKTSDMKGKQIGL 1030
            .|:..:.|..|..    |:||.|           .||:                   :..|:..|
 Worm  1023 EFTARLTVGQLEK----TELSQI-----------KYNK-------------------IFEKEFEL 1053

  Fly  1031 TLEHTDHMNENHAADALHRWNITLDVLASTKSNWFKLTGQVQRNSKDDEDDWKACTKLTYEPLVF 1095
            ..|:|:                      |.:..:.|:...:|:     |..:|:...|..|    
 Worm  1054 EQENTE----------------------SRREYFTKMVKSIQK-----EQGYKSVVSLRLE---- 1087

  Fly  1096 TKRPHTLNGDVVFGLATEESEC---------PEKGSTVQFAARAG--------PSE----HARAF 1139
            ..|.:|:|.:|......:...|         |....|.::..|:.        ||.    |.:..
 Worm  1088 APRDYTMNTEVTTVCDKQVRMCQWEVEIRRSPILEETKEWTLRSQLLVVRPEMPSSLRQLHDQPH 1152

  Fly  1140 LRSDKISLTDTDFCPK--EVLKFSPIPTSRYCK---RSNFENFTSITQYDMDLK----------- 1188
             |..::|||.|....|  ||...:.:..|:..|   |:...:|..:.:|::.:|           
 Worm  1153 -REVQLSLTSTWGSQKKSEVTVNAQLQQSKEQKKYERNMDRHFNGMPEYELLIKAARLNQINAVA 1216

  Fly  1189 ---------------FDNMPAWFELW-------SNRLDHLVSALSADKVDSLHMSQEINISMQTP 1231
                           ||.:.| :..|       :|..|.:|..|:.:.:.    .|.:||:||:|
 Worm  1217 EYKLTRETEQVLARYFDLVKA-YNYWTVSSRPENNENDRVVVQLTVEPMS----RQYVNITMQSP 1276

  Fly  1232 QDQFRLAVEVNGVKWRFHQIPFFYKLDS--KFDASHELTFDSGLKRSCSVINGIVNTFDDYLINL 1294
            .::    ||:..|     |:|..| |.|  :....|.|...||  ..|.|....:.||||.|.| 
 Worm  1277 IER----VELKNV-----QVPRVY-LPSIAQRSVKHLLNEASG--SVCKVQKNQIRTFDDVLYN- 1328

  Fly  1295 REIAVRPDCLTLLVADCSPLPQIAVFVTPSPVQGLSTNYGLRVHIGQNYF-------NFRARTDN 1352
               .....|.:|:..|||..|..||.  ....:..|....::|..|:...       ..|.:.|.
 Worm  1329 ---TPLTTCYSLIAKDCSEEPTFAVL--SKKTEKNSEEMIIKVIRGEQEIVAQLQNEEIRVKVDG 1388

  Fly  1353 SSLPTDEPVLIYLNQDQTPHNVRKKPYQWPIETSDYDFRVELNEQNILIVECTQLSSTIQFDLYN 1417
            ..:         |::|.:.|.:.:        ..:.|..:||.|            ..::||.|.
 Worm  1389 KKI---------LSEDYSAHQIER--------LGESDIVIELPE------------GEVRFDGYT 1424

  Fly  1418 I-LNFEIYGVYKHQMCGLCSKPLNRMQN--YTICELEANTPT 1456
            | .....|. .|:|:||||....:...|  ||    ..||.|
 Worm  1425 IKTQLPSYS-RKNQLCGLCGNNDDESTNEFYT----SDNTET 1461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-dNP_732076.1 LPD_N 28..589 CDD:214755 125/651 (19%)
DUF1943 632..>813 CDD:286281 42/229 (18%)
VWD 1277..1435 CDD:295339 37/165 (22%)
vit-1NP_001367671.1 Vitellogenin_N 24..620 CDD:396081 125/657 (19%)
DUF1943 655..940 CDD:401204 59/318 (19%)
VWD 1301..1458 CDD:214566 46/198 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159772
Domainoid 1 1.000 75 1.000 Domainoid score I5894
eggNOG 1 0.900 - - E1_KOG4338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I3236
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D25081at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14451
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23345
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.900

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