DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-d and vit-2

DIOPT Version :9

Sequence 1:NP_732076.1 Gene:cv-d / 41921 FlyBaseID:FBgn0265048 Length:1470 Species:Drosophila melanogaster
Sequence 2:NP_508868.1 Gene:vit-2 / 180781 WormBaseID:WBGene00006926 Length:1613 Species:Caenorhabditis elegans


Alignment Length:1624 Identity:313/1624 - (19%)
Similarity:614/1624 - (37%) Gaps:396/1624 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 YEYEGNVLVGAKPQDEGHQAPPTTGWIVRGKLTLQRQSELV-------------LAAALVIDD-- 82
            |:::|.||.|         .|..:..:.:.:::.:.:.:.|             :||:.:.:.  
 Worm    32 YKFDGLVLSG---------LPSASSELSQSRISARARIQAVDDRYIHLQLVNIRMAASHLPESEQ 87

  Fly    83 -VTLNNSGEKFLQNKEMYPPYK-----PFKIALTKDGAISHVVFKEGDPIWSMNFKRAIASVLQF 141
             .:||:     ::.:|:...||     |.:..| ::|.||.:.|.:.|..||.|.|||:.:::.|
 Worm    88 MPSLNS-----MEQRELSEEYKQMLELPLRAQL-RNGLISELQFDKEDAEWSKNMKRAVVNMISF 146

  Fly   142 --------------------QMKSSGAFVVDELGIHGTCRTEYFVSNRTNYISIRKTPEVKTCKP 186
                                |.:.:.:|..:|..:.|.|:..|.|........|.|:.....|..
 Worm   147 NPIAPRNEIEKIESSYDKEEQSEENTSFFTNEKTLEGDCQVAYTVIREQKKTIITKSINFDKCTE 211

  Fly   187 YSEAVHTTRSNVPPNTCEFDHQKSVIIGNEAIYGMSPHNE---------------TGYYLSMAHA 236
            .||..:..|.:.....||.|.:   :|..:.:|.....||               .|..:.....
 Worm   212 RSEIAYGLRYSSECPECEKDTE---LIRPQTVYTYVLENEELKESEVRSLYTVNVNGQEVMKTET 273

  Fly   237 KGTTLI---HTFES-----TGEAQFIN-----SELLLNF-----------LNETPIDNPIDIETS 277
            :...::   |:.:|     .||.:.|.     .:|:.:|           ..:.|:|..:.:..:
 Worm   274 RSKLVLEENHSIKSHIKKVNGEKESIIYSSRWEQLVEDFFKNGDKAEFAPFEKFPLDKKMHLIKT 338

  Fly   278 MAAEPSNLELQRLDPNDPTGGRSPQQQETLIAQAGTLLDSLAEALETTEF--KFSEPYDSTLSDV 340
            :..     ::|.::.|.|                           ||:.|  :....:.:|.:..
 Worm   339 ITE-----QIQEVENNMP---------------------------ETSHFLARLVRIFRTTSTSQ 371

  Fly   341 IKLLSEMDFDSLTKLYREVDIGTSYRQETIRNIFHEIIPRIGTKASVFLTHHLVLNK-----LTK 400
            :|.:.|       .||.:.|       :.|:::....:...|||.::   .|::::.     |..
 Worm   372 LKEIHE-------TLYVKAD-------KKIQSLMEHALAIAGTKNTI---QHILVHMENEDILPL 419

  Fly   401 PQIAVQLLIPMPFHIFELSAELVQKCEDFLNIGPDRPDVRQAAILSFATLIHNVYVAKGI----- 460
            .|| ::.:...||....::..|::..|.  .:..:...|||||.|:..:::..:...|.|     
 Worm   420 GQI-LKTIQETPFPSQSIAEALIKFAES--RVAKNNLVVRQAAWLAAGSVVRGIVDYKNIRPLVR 481

  Fly   461 -DKEKF-EEYVQKYFNAYLSDRDFDQKMLYLQGLNNLQLGNVANYLEPIVQDPNEHEDLKFQAAW 523
             ||.:. |::::.:...|.......:|:|.|:.:.|..|....|.|..|:.|..:...::.:|..
 Worm   482 EDKRELKEKFLRVFMQQYKDAETTYEKILALKTIGNAGLDISVNQLNEIIVDKRQPLPVRKEAID 546

  Fly   524 TTLALADRRAERIYEVYWPIFESRNASLELRVAAVTLLLISNPTAARLISIHRIIQSETDPHMIN 588
            ....|.|....:|.:|..||:::|....|:|:.|:..::.:.|..:.|:.:...::.||:..:..
 Worm   547 ALRLLKDTMPRKIQKVLLPIYKNRQYEPEIRMLALWRMMHTRPEESLLVQVVSQMEKETNQQVAA 611

  Fly   589 YYRTTVTSISETTYPCYQHL----RRLLSYMHRHLPQKPESRYWVTGNY----IF---DYRDSKF 642
            .....:...:.:|.||||.:    .::||:. |:.||:    ..:..:|    :|   .:..::|
 Worm   612 LTHQMIR
HFAMSTNPCYQRVAIVCSKVLSFT-RYQPQE----QMIASSYAQLPLFLQNSFSGAQF 671

  Fly   643 GIGAMLQ--VFLVGDPKSDMPVV---------AFFKFDTEALGKFTGQLAL------------YI 684
            ...|:.:  .||..|..:.:..|         |...|..:.:.|:. |:||            .:
 Worm   672 DFAAIFEKNSFLPKDLHASLDAVFGGNWNKYFAQIGFSQQHMDKYV-QMALEKLESLEKESTTVV 735

  Fly   685 KARGLPDTI------LNKMQSRNGSDPFTFKSIKALLAMLQAPIINSKDLHLEFI---LQMEGKT 740
            :.|.:...|      ..||..|.....:|.|...|::      .:..||:...|:   .|:....
 Worm   736 RGRRIQTGIKLLKELAQKMNIRARPATYTEKDAFAMV------YLRYKDMDYAFLPIDRQLVENL 794

  Fly   741 VLSYYLNQRMFRQLTYDNILERMQQIIRTDSH---INMQTVRWPFMNRYTVPTVLGTSSDVLLQT 802
            :..:..|.:    :.:..|...:.|.:..::|   ...:.:|       ..||.||....:..:.
 Worm   795 IEKFTSNGK----VQFSEIRRLLNQELEFETHHAAYFYEAIR-------KFPTTLGLPLTISGKI 848

  Fly   803 TVLTSLRGNITEQRNSPITKHTLEIDARYSSYAS--VRSRSYNPFLNLDHEINREQGFLIYIPFS 865
            ..:.|..|..:.:...  |:..|.::||.|..|:  ...|.:.|.  .:..:...|....|.|..
 Worm   849 PTVISAEGQFSLELEG--TELRLTVEARPSVAATHVYEMRMFTPL--FEQGVKSVQSVRAYTPIK 909

  Fly   866 SELHLNESGSKCRR----YSFSRPQNLTSGLSFKSRAVTKTR--GLITKTAAAPFEE--IMVPEG 922
            .:.   .:|.| |.    |....|:|..|.:|..:|.|...|  | .:|......||  ::||:.
 Worm   910 IQA---VAGMK-RNFEIVYKVVVPENQKSIVSLTTRPVVFLRFPG-FSKFEYIEAEERTVVVPQW 969

  Fly   923 R---NDVVQLFSYPMTDLGVRLSMTTN-LNELIKYRGMLLKSEF---TEN-----GFSGNMVVNA 975
            :   .::.::|::    ||:.:|...| ||:......:|.:.:|   .||     .|:..:.|..
 Worm   970 QQKTQEIEKVFNF----LGLEVSTRGNILNQHTLENWLLAEQDFEVSVENKNRPAEFTARLTVGQ 1030

  Fly   976 LMYIFGFTQLSSIHLG--HDRNFTMLMYNEKNTRIEGNFCAEDVLKTSDMKGKQIGLTLEHTDHM 1038
            |..    |:||.|...  .::.|.:...|.::.|...|...:::.|....| ..|.|.||     
 Worm  1031 LEK----TELSQIKYNKIFEKEFELEQENTESRREYFNKMVKNIQKEQGYK-SVISLKLE----- 1085

  Fly  1039 NENHAADALHRWNITLDVLASTKSNWFKLTGQVQRNS-KDDEDDWKACTKLTYEPLVFTKRPHTL 1102
                 |...:..|..|..:...:....:...:::|:. .::..:|...::|.   :|..:.|.:|
 Worm  1086 -----APRDYTMNTELTTVCDKQVRMCQWEVEIRRSPILEETKEWTLRSQLL---VVRPEMPSSL 1142

  Fly  1103 -------NGDVVFGLATEESECPEKGSTVQFAARAGPSEHARAFLRS-DKISLTDTDFCPKEVLK 1159
                   :.:|...|.:....  :|.|.|...|:...|:..:.:.|: |:              :
 Worm  1143 RQLRDQPHREVQLSLTSTWGS--QKKSEVTVNAQLQQSKEQKKYERNMDR--------------Q 1191

  Fly  1160 FSPIPT-SRYCKRSNFENFTSITQYDMDLKFDNMPA-WFEL------W-------SNRLDHLVSA 1209
            |:.:|. ....|.:......::.:|.:..:.:.:.| :|:|      |       :|..|.:|..
 Worm  1192 FNGMPEYELLIKAARLNQINAVAEYKLTRETEQVLARYFDLVKTYNYWTVSSRPENNENDRVVVQ 1256

  Fly  1210 LSADKVDSLHMSQEINISMQTPQDQFRLAVEVNGVKWRFHQIPFFYKLDS--KFDASHELTFDSG 1272
            |:.:.:.    .|.:||:||:|.::    :|:..|     |:|..| |.|  :....|:||..||
 Worm  1257 LTVEPMS----RQYVNITMQSPMER----IELKNV-----QVPRVY-LPSIAQRSVKHQLTEASG 1307

  Fly  1273 LKRSCSVINGIVNTFDDYLINLREIAVRPDCLTLLVADCSPLPQIAVFVTPSPVQGLSTNYGLRV 1337
              ..|.|....:.||||.|.|    .....|.:|:..|||..|..||                  
 Worm  1308 --SVCKVQKNQIRTFDDVLYN----TPLTTCYSLIAKDCSEEPTFAV------------------ 1348

  Fly  1338 HIGQNYFNFRARTDNSSLPTDEPVLIYLNQDQ------TPHNVRKKPYQWPIETSDYD-FRVELN 1395
                    ...:|:.:|   :|.::..:..:|      ....:|.|.....|::.||. :::|..
 Worm  1349 --------LSKKTEKNS---EEMIIKVIRGEQEIVAQLQNEEIRVKVDGKKIQSEDYSAYQIERL 1402

  Fly  1396 EQNILIVECTQLSSTIQFDLYNI-LNFEIYGVYKHQMCGLCSKPLNRMQN--YTICELEANTPT 1456
            .::.:::|..:  ..::||.|.| .....|. .|:|:||||....:...|  ||    ..||.|
 Worm  1403 GESAIVIELPE--GEVRFDGYTIKTQLPSYS-RKNQLCGLCGNNDDESTNEFYT----SDNTET 1459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-dNP_732076.1 LPD_N 28..589 CDD:214755 118/649 (18%)
DUF1943 632..>813 CDD:286281 37/222 (17%)
VWD 1277..1435 CDD:295339 36/165 (22%)
vit-2NP_508868.1 Vitellogenin_N 24..618 CDD:279663 118/655 (18%)
DUF1943 653..944 CDD:286281 57/316 (18%)
VWD 1299..1456 CDD:214566 46/198 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159767
Domainoid 1 1.000 75 1.000 Domainoid score I5894
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I3236
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D25081at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14451
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23345
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.000

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