DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-d and vit-4

DIOPT Version :9

Sequence 1:NP_732076.1 Gene:cv-d / 41921 FlyBaseID:FBgn0265048 Length:1470 Species:Drosophila melanogaster
Sequence 2:NP_508612.1 Gene:vit-4 / 180646 WormBaseID:WBGene00006928 Length:1603 Species:Caenorhabditis elegans


Alignment Length:1574 Identity:294/1574 - (18%)
Similarity:577/1574 - (36%) Gaps:332/1574 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QMLYEYEGNVLVGAKPQDEGHQAPPTT-----GWIVRGKLTLQRQSELVLAAALVIDDVTLNNS- 88
            :.:|:::|.:|.|.          |||     ..::..:..||...:..:...|:  |:..:.| 
 Worm    29 EYVYKFDGLLLSGL----------PTTFSDASQTLISCRTRLQAVDDRYIHLQLI--DIQYSASH 81

  Fly    89 ---GEKF-----LQNKEMYPPYK-----PFKIALTKDGAISHVVFKEGDPIWSMNFKRAIASVLQ 140
               .|::     |:.:|:....|     ||: |..::|.:|.:.|...|..||.|.||:|.::..
 Worm    82 IPQSEQWPKIESLEQRELSDELKELLELPFR-AQIRNGLVSEIQFSSEDAEWSKNAKRSILNLFS 145

  Fly   141 FQM-----------------KSSGAFVVDELGIHGTCRTEYFVSNRTNYISIRKTPEVKTCKPYS 188
            .:.                 |.|..|.|.|..:.|.|...|.:..........|:.....|....
 Worm   146 LRKSAPVDEMSQDQKDMESDKDSLFFNVHEKTMEGDCEVAYTIVQEGGKTIYTKSVNFDKCITRP 210

  Fly   189 EAVHTTRSNVPPNTCEFDHQKSVIIGNEAIYGMSPHNETGYYLSMAHAKGTTLIHTFESTGEAQF 253
            |..:..|.......||.:.|   .:..:.:|..:..||      .........|:|....|: :.
 Worm   211 ETAYGLRFGSECKECEKEGQ---FVQPQTVYTYTFKNE------KLQESEVNSIYTLNVNGQ-EV 265

  Fly   254 INSE--LLLNFLNETPIDNPIDIETSMAAEPSNLELQRLDPNDPTGGRSPQQQ-------ETLIA 309
            :.||  ..:.|:.|:.|               |.|::::.        .|:::       |.||.
 Worm   266 VKSETRAKVTFVEESKI---------------NREIKKVS--------GPKEEIVYSMENEKLIE 307

  Fly   310 Q-------------AGTLLDSLAEALETTEFKFSEPYDST------LSDVIKLLSEMDFDSLTKL 355
            |             ....::...|.||....:..|...:|      ::..:::......:.|.|:
 Worm   308 QFYKQGDKAEVNPFKAIEIEQKVEQLEEIFRQIQEHEQNTPETVHLIARAVRMFRMCTIEELKKV 372

  Fly   356 YREVDIGTSYRQETIRNIFHEIIPRIGTKASV-FLTHHLVLNKLTKPQIAVQL-------LIPMP 412
            :..:   .:..::.::.:....:...|||.:: .|.||.....:| |..|.:|       |.|..
 Worm   373 HTTI---YTKAEKKVQLVIETTLAVAGTKNTIQHLIHHFEKKSIT-PLRAAELLKSVQETLYPSE 433

  Fly   413 FHIFELSAELVQKCEDFLNIGPDRPDVRQAAILS-------FATLIHNVYVAKGIDKEKFEEYVQ 470
             ||.:|..:|.|.     .:......:||:|.|:       ||:...::.:.:...::..|:||:
 Worm   434 -HIADLLIQLAQS-----PLSEKYEPLRQSAWLAAGSVVRGFASKTQDLPLIRPASRQTKEKYVR 492

  Fly   471 KYFNAYLSDRDFDQKMLYLQGLNNLQLGNVANYLEPIVQDPNEHEDLKFQAAWTTLALADRRAER 535
            .:...:.:.....:|:|.|:.|.|..:......|..::|||.:...::.:|......|.|....:
 Worm   493 VFMQHFRNADSTYEKVLALKTLGNAGIDLSVYELVQLIQDPRQPLSIRTEAVDALRLLKDVMPRK 557

  Fly   536 IYEVYWPIFESRNASLELRVAAVTLLLISNPTAARLISIHRIIQSETDPHMINYYRTTVTSISET 600
            |.:|..|::::|....|||:||:..::.:.|....|..|...:::|::.|:..:....:...|::
 Worm   558 IQKVLLPVYKNRQNKPELRMAALWRMMHTIPEEPVLAHIVSQMENESNQHVAAFTYNVLRQFSKS 622

  Fly   601 TYPCYQHL----RRLLSYMHRHLPQKPE-SRY---------WVTGNYIFDYRDSKFGIGAMLQVF 651
            |.||||.|    .::|.:. |:.||:.. |.|         |::| ..||:.             
 Worm   623 TNPCYQQLAVRCSKVLLFT-RYQPQEQMLSTYSQLPLFNSEWLSG-VQFDFA------------- 672

  Fly   652 LVGDPKSDMPVVAFFKFDTEALG---KFTGQLALYIKARGLPDTILNKMQSRN----GSDPFTFK 709
            .:.:..:.:|......|:|...|   |:..|:.  ...:.....||..::..:    .||....:
 Worm   673 TIFEKNAFLPKEVQASFETVFGGNWNKYFAQVG--FSQQNFEQVILKTLEKLSLYGKQSDELRSR 735

  Fly   710 SIKALLAMLQAPI-----------INSKDLHLEFILQMEGKTVLSYYLNQRMFRQLTYDNILER- 762
            .:::.:.|||..:           .:|::.|..|.|:.:....:...::..     |.||::|: 
 Worm   736 RVQSGIQMLQEIVKKMNIRPRVQQTDSQNAHAVFYLRYKEMDYIVLPIDME-----TIDNVVEKY 795

  Fly   763 ----------MQQIIRTDSHINMQTVRWPFMNRYTVPTVLGTSSDVLLQTTVLTSLRGNITEQRN 817
                      :...:..||...:....:.:.....:||.:|....:..:...:.|:.|.::.:..
 Worm   796 VRNGEFDIKSLLTFLTNDSKFELHRALFFYEAERRIPTTIGMPLTISGKMPTILSINGKVSIELE 860

  Fly   818 SPITKHTLEIDARYSSYASVRSRSYNPFLNLDHEINREQGFLIYIP--FSSELHLNESGSKCRRY 880
            ....:..|:|....::......|.:.|.  ::..:...|...::.|  |.|.:.|.::..:. .:
 Worm   861 KLGARLVLDIVPTVATTHVTEMRFWYPV--IEQGVKSLQSARLHTPLRFESTVELKKNTLEI-TH 922

  Fly   881 SFSRPQNLTSGLSFKSRAVTKTRGLITKTAAAPFEEIMVPEGRNDVVQLFSYPMT---------D 936
            .|..|:|..:.:|..:|.|...|  :.|...:.:     .|.....:....|.|:         .
 Worm   923 KFVVPENKKTTVSVHTRPVAFIR--VPKNQDSEY-----VEAEEKTISHSQYQMSTEEIDRQYET 980

  Fly   937 LGVRLSMTTNLNELIKYRGMLLKS---EFT-EN-----GFSGNMVVNALMYIFGFTQLSSIHLG- 991
            .|:|::...|:........:|:..   ||| ||     .|:..:.:..|..    |.||.|... 
 Worm   981 FGLRINAQGNVLSQWTLPMVLMTEQDFEFTLENKNRPVEFTARVTIGNLEK----TDLSEIKFDK 1041

  Fly   992 -HDRNFTMLMYNEKNTRIEGNFCAEDVLKTSDMKGKQIGLTLEHTDHMNENHAADALHRWNITLD 1055
             .::.|.:.....:|.|...:....::......| ..|.|.||....|          .||..|.
 Worm  1042 IFEKEFDLENNESENRRQYFHKMIREIQSEQGFK-NLITLKLEAPQQM----------YWNTELR 1095

  Fly  1056 VLASTKSNWFKLTGQVQRNSKDDED-DWKACTK-LTYEPLV------FTKRPHTLNGDVVFGLAT 1112
            .:........|:....:|:..:.|: :|...|: |...|.:      ..::||.   :|...|..
 Worm  1096 TVCDKWIRMCKVEMDARRSPIEHENKEWTLRTELLAARPQMPSSLRQLREQPHR---EVQLALNA 1157

  Fly  1113 EESECPEKGSTVQFAARAGPSEHARAFLRSDKISLTDTDFCPKEVLKFSPIPTSRY---CKRSNF 1174
            :...  .|.|.:.|.|:...|...:.|||:.:             .::..||....   ..|.|.
 Worm  1158 KWGS--SKKSEITFNAQLEQSTEQKKFLRNIE-------------REYKGIPEYELLIKAARLNQ 1207

  Fly  1175 EN------FTSITQYDMDLKFDNMPAWFELWS-------NRLDHLVSALSADKVDSLHMSQEINI 1226
            .|      .|..::|.....||.:.| :..|:       |....:|..||.:.:...:|    |:
 Worm  1208 VNVVSEYKLTPESEYTFSRIFDLIKA-YNFWTVSEKRVQNEDRRVVLQLSVEPLSRQYM----NM 1267

  Fly  1227 SMQTPQDQFRLAVEVNGVKWRFHQIPFFYKLDSKFDASHELTFDSGLKRSCSVINGIVNTFDDYL 1291
            ::|||:.:    ||:..|:.....:|...: .:.|..:.|.|     ..:|.|....|:|||:.:
 Worm  1268 TIQTPEQE----VELKNVRIPRVVLPTIAR-RAMFQQTWEKT-----GATCKVDQSEVSTFDNVI 1322

  Fly  1292 INLREIAVRPDCLTLLVADCSPLPQIAVFVTPSPVQGLSTNYGLRVHIGQNYFNFRARTDNSSLP 1356
            ..    |....|.:|:..|||..|:.||               |...|.:|......:.    :.
 Worm  1323 YR----APLTTCYSLVAKDCSEQPRFAV---------------LAKKINKNSEELLVKV----VR 1364

  Fly  1357 TDEPVLIYLNQDQTPHNVRKKPYQWPIETSDYDFRVELNEQNILIVECTQLSSTIQFDLYNILNF 1421
            .:|.:::..:.|:....|..|... |.|...|:  :|:...|::::....  ..::||.|.:...
 Worm  1365 REEEIVVKKSDDKFLVKVDGKKVN-PTELEQYN--IEILGDNLIVIRLPH--GEVRFDGYTVKTN 1424

  Fly  1422 EIYGVYKHQMCGLC 1435
            ......::|:||||
 Worm  1425 MPSVASQNQLCGLC 1438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-dNP_732076.1 LPD_N 28..589 CDD:214755 121/637 (19%)
DUF1943 632..>813 CDD:286281 30/209 (14%)
VWD 1277..1435 CDD:295339 33/157 (21%)
vit-4NP_508612.1 Vitellogenin_N 24..617 CDD:279663 121/643 (19%)
DUF1943 651..942 CDD:286281 48/314 (15%)
VWD 1300..1454 CDD:214566 37/172 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159771
Domainoid 1 1.000 75 1.000 Domainoid score I5894
eggNOG 1 0.900 - - E1_KOG4338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I3236
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D25081at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14451
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23345
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.900

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