DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-d and vit-5

DIOPT Version :9

Sequence 1:NP_732076.1 Gene:cv-d / 41921 FlyBaseID:FBgn0265048 Length:1470 Species:Drosophila melanogaster
Sequence 2:NP_508589.1 Gene:vit-5 / 180630 WormBaseID:WBGene00006929 Length:1603 Species:Caenorhabditis elegans


Alignment Length:1565 Identity:290/1565 - (18%)
Similarity:577/1565 - (36%) Gaps:314/1565 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QMLYEYEGNVLVGAKPQDEGHQAPPTTG-----WIVRGKLTLQRQSELVLAAALVIDDVTLNNS- 88
            :.:|:::|.:|.|.          ||..     .::..:..||...:..:  .|.:.|:..:.| 
 Worm    29 EYVYKFDGLLLSGL----------PTASSDASQTLISCRTRLQAVDDRYI--HLQLTDIQYSASH 81

  Fly    89 ---GEKF-----LQNKEMYPPYK-----PFKIALTKDGAISHVVFKEGDPIWSMNFKRAIASVLQ 140
               .|::     |:.:|:...:|     ||: |..::|.||.:.|...|..||.|.||:|.::..
 Worm    82 IPQSEQWPKIESLEQRELSDEFKELLELPFR-AQIRNGLISEIQFSSEDAEWSKNAKRSILNLFS 145

  Fly   141 FQM-----------------KSSGAFVVDELGIHGTCRTEYFVSNRTNYISIRKTPEVKTCKPYS 188
            .:.                 |.|..|.|.|..:.|.|...|.:..........|:.....|....
 Worm   146 LRKSAPVDEMNQDQKDMESDKDSLFFNVHEKTMEGDCEVAYTIVQEGEKTIYTKSVNFDKCITRP 210

  Fly   189 EAVHTTRSNVPPNTCEFDHQKSVIIGNEAIYGMSPHNETGYYLSMAHAKGTTLIHTFESTGEAQF 253
            |..:..|.......||.:.|   .:..:.:|..:..||. ...|..|:     ::|....|: :.
 Worm   211 ETAYGLRFGSECKECEKEGQ---FVKPQTVYTYTFKNEK-LQESEVHS-----VYTLNVNGQ-EV 265

  Fly   254 INSE--LLLNFLNETPIDNPIDIETSMAAEPSNLELQRLDPNDPTGGRSPQQQETLIAQAGTLLD 316
            :.||  ..:.|:.|:.|               |.|::::.        .|:::.....:...|::
 Worm   266 VKSETRAKVTFVEESKI---------------NREIKKVS--------GPKEEIVYSMENEKLIE 307

  Fly   317 SL---AEALETTEFKFSEPYDST--LSDVIKLLSEMDFDS---------LTKLYREVDI------ 361
            ..   .:..|...||..|.....  |.::.:.:.|.:.::         ..:::|...|      
 Worm   308 QFYQQGDKAEVNPFKAIEMEQKVEQLQEIFRQIQEHEQNTPETVHLIARAVRMFRMCTIEELKKV 372

  Fly   362 -GTSY--RQETIRNIFHEIIPRIGTKASV-FLTHHLVLNKLTKPQIAVQL-------LIPMPFHI 415
             .|.|  .::.::.:....:...|||.:: .|.||.....:| |..|.:|       |.|.. ||
 Worm   373 HTTIYTKAEKKVQLVIETTLAVAGTKNTIQHLIHHFEKKSIT-PLRAAELLKSVQETLYPSE-HI 435

  Fly   416 FELSAELVQKCEDFLNIGPDRPDVRQAAILS-------FATLIHNVYVAKGIDKEKFEEYVQKYF 473
            .:|..:|.|.     .:......:||:|.|:       ||:...::.:.:...::..|:||:.:.
 Worm   436 ADLLIQLAQS-----PLSEKYEPLRQSAWLAAGSVVRGFASKTQDLPLIRPASRQTKEKYVRVFM 495

  Fly   474 NAYLSDRDFDQKMLYLQGLNNLQLGNVANYLEPIVQDPNEHEDLKFQAAWTTLALADRRAERIYE 538
            ..:.:.....:|:|.|:.|.|..:......|..|:|||.:...::.:|......|.|....:|.:
 Worm   496 QHFRNADSTYEKVLALKTLGNAGIDLSVYELVQIIQDPRQPLSIRTEAVDALRLLKDVMPRKIQK 560

  Fly   539 VYWPIFESRNASLELRVAAVTLLLISNPTAARLISIHRIIQSETDPHMINYYRTTVTSISETTYP 603
            |..|::::|....|||:||:..::.:.|....|..|...:::|::.|:..:....:....::|.|
 Worm   561 VLLPVYKNRQNKPELRMAALWRMMHTIPEEPVLAHIVSQMENESNQHVAAFTYNVLRQFYKSTNP 625

  Fly   604 CYQHL----RRLLSYMHRHLPQKPE-SRY---------WVTGNYIFDYRDSKFGIGAMLQVFLVG 654
            |||.|    .::|.:. |:.||:.. |.|         |::| ..||:.             .:.
 Worm   626 CYQQLAVRCSKILLFT-RYQPQEQMLSTYSQLPLFNSEWLSG-VQFDFA-------------TIF 675

  Fly   655 DPKSDMPVVAFFKFDTEALG---KFTGQLALYIKARGLPDTILNKMQSRN----GSDPFTFKSIK 712
            :..:.:|......|:|...|   |:..|:.  ...:.....||..::..:    .||....:.::
 Worm   676 EKNAFLPKEVQASFETVFGGNWNKYFAQVG--FSQQNFEQVILKTLEKLSLYGKQSDELRSRRVQ 738

  Fly   713 ALLAMLQAPI-----------INSKDLHLEFILQMEGKTVLSYYLNQRMFRQLTYDNILER---- 762
            :.:.|||..:           .:|::.|..|.|:.:....:...::..     |.|.::|:    
 Worm   739 SGIQMLQEIVKKMNIRPRVQQTDSQNAHAVFYLRYKEMDYIVLPIDME-----TIDTLVEKYVRN 798

  Fly   763 -------MQQIIRTDSHINMQTVRWPFMNRYTVPTVLGTSSDVLLQTTVLTSLRGNITEQRNSPI 820
                   :...:..||...:....:.:.....:||.:|....:..:...:.|:.|.::.:.....
 Worm   799 GEFDIKSLLTFLTNDSKFELHRALFFYEAERRIPTTIGMPLTISGKMPTILSINGKVSIELEKLG 863

  Fly   821 TKHTLEIDARYSSYASVRSRSYNPFLNLDHEINREQGFLIYIP--FSSELHLNESGSKCRRYSFS 883
            .:..|:|....::......|.:.|.  ::..:...|...::.|  |.|.:.|.::..:. .:.|.
 Worm   864 ARLVLDIVPTVATTHVTEMRFWYPV--IEQGVKSLQSARLHTPLRFESTVELKKNTLEI-THKFV 925

  Fly   884 RPQNLTSGLSFKSRAVTKTRGLITKTAAAPFEEIMVPEGRNDVVQLFSYPMT---------DLGV 939
            .|:|..:.:|..:|.|...|  :.|...:.:     .|.....:....|.|:         ..|:
 Worm   926 VPENKKTTVSVHTRPVAFIR--VPKNQDSEY-----VEAEEKTISHSQYQMSTEEIDRQYETFGL 983

  Fly   940 RLSMTTN-LNELIKYRGMLLKSEF---TEN-----GFSGNMVVNALMYIFGFTQLSSIHLG--HD 993
            |::...| |::......::.:.:|   .||     .|:..:.:..|..    |.||.|...  .:
 Worm   984 RINAQGNVLSQWTLPMVLMTEQDFEYTLENKNRPVEFTARVTIGNLEK----TDLSEIKFDKIFE 1044

  Fly   994 RNFTMLMYNEKNTRIEGNFCAEDVLKTSDMKGKQIGLTLEHTDHMNENHAADALHRWNITLDVLA 1058
            :.|.:.....:|.|...:....::......| ..|.|.||....|          .||..|..:.
 Worm  1045 KEFDLENNESENRRQYFHKMIREIQSEQGFK-NLITLKLEAPQQM----------YWNTELRTVC 1098

  Fly  1059 STKSNWFKLTGQVQRNSKDDED-DWKACTKLTYEPLVFTKRPHTLNGDVVFGLATEESECPEKGS 1122
            .......|:....:|:..:.|: :|...|:|      ...||...:.      ..:..|.|.:..
 Worm  1099 DKWIRMCKVEMDARRSPMEHENKEWTLRTEL------LAARPQMPSS------LRQLREQPHREV 1151

  Fly  1123 TVQFAARAGPSEHARAFLRSD-KISLTDTDFCPKEVLKFSPIPTSRY---CKRSNFEN------F 1177
            .:.|.|:.|.|:.:...:.:. :.|.....|......::..||....   ..|.|..|      .
 Worm  1152 QLAFNAKWGSSKKSEITVNAQLEQSTEQKKFIRNIEREYKGIPEYELLIKAARLNQVNVVSEYKL 1216

  Fly  1178 TSITQYDMDLKFDNMPAWFELWS-------NRLDHLVSALSADKVDSLHMSQEINISMQTPQDQF 1235
            |..::|.....||.:.| :..|:       |....:|..||.:.:...:|    |:::|||:.: 
 Worm  1217 TPQSEYTFSRIFDLIKA-YNFWTVSEKRVQNENRRVVLQLSVEPLSRQYM----NMTIQTPEQE- 1275

  Fly  1236 RLAVEVNGVKWRFHQIPFFYKLDSKFDASHELTFDSGLKRSCSVINGIVNTFDDYLINLREIAVR 1300
               ||:..|:.....:|...: .:.|..:.|.|     ..:|.|....|:|||:.:..    |..
 Worm  1276 ---VELKNVRIPRVVLPTIAR-SAMFQQTWEKT-----GATCKVDQSEVSTFDNVIYR----APL 1327

  Fly  1301 PDCLTLLVADCSPLPQIAVFVTPSPVQGLSTNYGLRVHIGQNYFNFRARTDNSSLPTDEPVLIYL 1365
            ..|.:|:..|||..|:.||               |...|.:|......:.    :..:|.:::..
 Worm  1328 TTCYSLVAKDCSEQPRFAV---------------LAKKINKNSEELLVKV----VRREEEIVVKK 1373

  Fly  1366 NQDQTPHNVRKKPYQWPIETSDYDFRVELNEQNILIVECTQLSSTIQFDLYNILNFEIYGVYKHQ 1430
            :.|:....|..|... |.|...|:  :|:...|::::...|  ..::||.|.:.........::|
 Worm  1374 SDDKFLVKVDGKKVN-PTELEQYN--IEILGDNLIVIRLPQ--GEVRFDGYTVKTNMPSVASQNQ 1433

  Fly  1431 MCGLC 1435
            :||||
 Worm  1434 LCGLC 1438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-dNP_732076.1 LPD_N 28..589 CDD:214755 123/634 (19%)
DUF1943 632..>813 CDD:286281 29/209 (14%)
VWD 1277..1435 CDD:295339 34/157 (22%)
vit-5NP_508589.1 Vitellogenin_N 24..617 CDD:279663 123/640 (19%)
DUF1943 651..942 CDD:286281 47/314 (15%)
VWD 1300..1454 CDD:214566 38/172 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159770
Domainoid 1 1.000 75 1.000 Domainoid score I5894
eggNOG 1 0.900 - - E1_KOG4338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I3236
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D25081at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14451
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23345
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.900

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