DRSC/TRiP Functional Genomics Resources

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Protein Alignment cv-d and vtga2

DIOPT Version :9

Sequence 1:NP_732076.1 Gene:cv-d / 41921 FlyBaseID:FBgn0265048 Length:1470 Species:Drosophila melanogaster
Sequence 2:XP_002931744.3 Gene:vtga2 / 100485207 XenbaseID:XB-GENE-5791429 Length:1802 Species:Xenopus tropicalis


Alignment Length:1830 Identity:313/1830 - (17%)
Similarity:586/1830 - (32%) Gaps:590/1830 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 HAFSIIGLNKQMLYEYEGNVLVGAKPQDEGHQAPPTTGWIVRGKLTLQRQSELVLAAALVIDDVT 84
            |...:...:|..:|.||..:|.|.          |.:| :.|..:.:..:.|:...|        
 Frog    19 HIEPVFSESKASVYNYEAVILNGF----------PESG-LSRAGIKINCKVEISAFA-------- 64

  Fly    85 LNNSGEKFLQNKEMYP-----PYKPF----KIA------LTKDGAISHVVFKEGDPI-------W 127
             ..|....:|:.|:..     |..||    |:.      |||.....:...:.||..       .
 Frog    65 -QRSYFIKIQSPEIKEYNGVWPKDPFTRSSKLTQALADQLTKPARFEYSYGRVGDIFVPDDVSDT 128

  Fly   128 SMNFKRAIASVLQFQM-KSSGAFVVDELGIHGTCRTEYFV--SNRTNYISIRKTPEVKTCKPYSE 189
            ::|..|.|.::||..: ||...:.:.|..:.|.|.|.|.:  ..|.:.|:|.|..:...|:   |
 Frog   129 AVNIYRGILNLLQLTLKKSQNVYDLQESSVGGICHTRYVIQEDRRGDRINIIKATDFNNCQ---E 190

  Fly   190 AVHTTRSNVPPNTCEFDHQKSVIIGNEAIYGMSPHNETGYYLSMAHAKGTTLIHT---------- 244
            .|..:......:.|....|.:..:...|.|         .|...|..:||.::..          
 Frog   191 KVSKSFGFELSDFCHSCKQMNRNLRGAATY---------TYKLKARDQGTVIMEVTARQVIQFTP 246

  Fly   245 FESTGEAQFINSELLLNFLN---------ETPIDNPIDIETSMAAEPSNLELQRLDPNDPTGGRS 300
            |.....|..:.:..:|.::.         :..:.|..::....|:|...:.:..:....|.    
 Frog   247 FNERNGAATMEARQVLAWVGSKSGQMNPPQIQLKNRGNLHYQFASESHQMPIHLIKTKSPE---- 307

  Fly   301 PQQQETLIAQAGTLLDSLAEALETTEFKFSEPYDSTLSDVIKLLSEMDFDSLTKLYREVDIGTSY 365
                    |||..:|..|   ::.|:.:..|...:....:|:||...||:::..|:::....|.|
 Frog   308 --------AQAVEVLQHL---IQDTQQQIREDAPAKFLQLIQLLRASDFENIQALWKQFAQRTQY 361

  Fly   366 RQETIRNIFHEIIPRIGTKASVFLTHHLVLN-KLTKPQIAVQLLIPM-----PFHIFELSAELVQ 424
            |:..:     ..||..||...:.|...|:.| :||..:.||.:...|     ....|:.||:.||
 Frog   362 RRWLL-----NAIPMAGTVDCLKLIKQLIHNEELTPQEAAVIVTFAMRSARPSQRAFQFSADFVQ 421

  Fly   425 --KCEDFLNIGPDRPDVRQAAILSFATLIHNVYVAKGIDKEKFEEYVQKYFNAYLSDRDFDQKML 487
              |.:.:       ..|.:||:||:.|:                  |:||.:             
 Frog   422 DSKVQKY-------DVVYKAALLSYGTM------------------VKKYCD------------- 448

  Fly   488 YLQGLNNLQLGNVANY-LEPI------VQDPNEHEDL--------------------KFQAAWTT 525
                    ||.:..|. |||:      ..:....||:                    ||..|.|:
 Frog   449 --------QLSSCPNQALEPLHELAAEAANKGHAEDIALALKALGNAGQPESIKQIQKFLPAITS 505

  Fly   526 LA-----------------LADRRAERIYEVYWPIFESRNASLELRVAAVTLLLISNPTAARLIS 573
            .|                 :|.:...::.|:...||..|:|..|:|:.|...|..:.|..|.:.:
 Frog   506 SAYQLPVRIQTDAVMALRNIAKQEPRKVQEILLQIFMDRDARTEVRMMACLALFETKPGLATVTA 570

  Fly   574 IHRII--QSETDPHMINY--------YRTTVTSISETTYPCYQHLRRL------LSYMHRHLPQK 622
            |..:.  :|:|:..:.::        .::.|..:......|...|:.|      |.|.:..:.:.
 Frog   571 IANVAARESKTNLQLASFTYSQMKALAKSRVAQLEPLAAACGVALKILNPSLDNLGYRYSKVMRV 635

  Fly   623 PESRYWVTGNYIFDYRDSKFGIGAMLQVFLVGDPKSDMPVVAFFKFDTEALGKFTGQLALYIKAR 687
            ...:|             ....|...:.:::....:..||....|.........:..:.:.|:..
 Frog   636 DTFKY-------------NLMAGVAAKFYVMNSANTMFPVFILAKLREYTSAVESDNIEIGIRGE 687

  Fly   688 GLPDTILNKMQSRNGSDPFTFK---SIKALLAM----LQAPIINSKDLHLEFILQMEGKTVLSYY 745
            |: :..|.|..::....|...|   .:|.||..    .|.|:::.       .:::||:.:....
 Frog   688 GI-EEFLRKQNTQFADFPMRKKISQLVKTLLGFKGLPSQVPLLSG-------YVKLEGQEIAFSQ 744

  Fly   746 LN----QRMFRQLT--------YDNILERMQQIIRTDSHINMQTVRW-PFMNRYTVPTVLGTSSD 797
            ||    |.:||.|.        ..|:|.::     .:..:......| .:..|:.:||.:|..::
 Frog   745 LNKEVIQNIFRALNEPAERHTMIRNVLNKL-----LNGVVGQYAQAWMSWEYRHIIPTTVGLPAE 804

  Fly   798 V-LLQTTVLTS---------------------------LRGNI----------TEQRNSPITKHT 824
            : |.|:.::.:                           |.|.:          |...||.:.:..
 Frog   805 ISLYQSAIVNAGVNSDMKVKPNPSGDFSAAQLLESQIQLNGQVKPSIRVDTVATIGINSRLLQAG 869

  Fly   825 LE--------IDARYSSYASVRSRSYN----PFLNLDHEIN-REQGF--------------LIYI 862
            :|        :.|::::|..::.|::.    |....||.:. |.|.|              .:.:
 Frog   870 IEFHGKMHAHLPAKFTAYLDMKERNFKIETPPCQQEDHLVQFRAQTFAFTRNIADLDAARKTLVV 934

  Fly   863 PFSSE-----LHLNESGSKC---------------RRYSF------SRPQNLTS----------G 891
            |.:||     .|...:|...               |:||.      :.|.|:.|          |
 Frog   935 PRNSEQNILKKHFESTGRASAEGASMMEDSSEMGPRKYSTEPGPHQNAPANVNSYDACTKFSKAG 999

  Fly   892 LSF------KSRAVTKTRGLITKTAAAPFEEIMVP---EGRNDVVQLFSYPMTDLGVRLSMTTNL 947
            ::|      .:.|..:...|........|:..|.|   ||..:.:|            |.:|...
 Frog  1000 VNFCIQCKTHNAAAHRNTFLYQAVGEHEFKFTMKPAHSEGAIEKLQ------------LEITAGP 1052

  Fly   948 NELIKYRGMLLKSEFTENGFSGNMVVNALMYIFGFTQLSSIHLGHDRNFTMLM---YNEKNTRIE 1009
            ....|.:|::...:..:.....:.|...|..|.|..  .||   .|.|.|.::   .:.||.:.:
 Frog  1053 QAASKIKGLVEVKDTEDEQMDDSAVQKRLKMILGID--DSI---KDTNGTAVLRSKQSRKNKKHK 1112

  Fly  1010 GNFCAEDVLK------------------------------------TSDMKGKQIGLTLEHTDHM 1038
            ....||.|.:                                    :|.....|.....||..|.
 Frog  1113 RPLDAEVVAEAKKPQSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSYSQRSRRREHHPHQ 1177

  Fly  1039 ------NENHAADALHRW----------------------NITLDVLASTKSNWFKLTGQVQRNS 1075
                  :.:...|..:.|                      :.:....:|:.|:......:..||.
 Frog  1178 QRQPSSSSSQEKDKKNNWQENRKHGQKAQSSSSSSSSSSSSSSSSSSSSSSSSSSSNENRRHRNR 1242

  Fly  1076 KDDEDDWK-------------ACTKLTYEPLVFTKRPHTLNGDVVFGLATEESECPEKGSTVQFA 1127
            :.|.:..|             :.:..:.......|:.|....|:.|..|....:..::.|:   :
 Frog  1243 QHDNEQAKKQHEQNKNRYSSSSSSSSSSSSSEMQKKHHRNFYDLHFRRAARTKDTEKRASS---S 1304

  Fly  1128 ARAGPSEHARAFLRSDKISLTDTDFCPKEVLKFSPI---PTSRYCKRSNFENFTS----ITQYDM 1185
            :.:..|....|:....|.........|..|:.|..:   .|.:..:...::::.|    |..|.|
 Frog  1305 SESSSSSSESAYANRHKAKFLGDKQPPVLVVTFKAVRNDNTKQGYQMVVYQDYHSSKQQIQAYVM 1369

  Fly  1186 DL-----------------------------------------KFDNMPA------WFEL---W- 1199
            |:                                         .|.|.||      |.::   | 
 Frog  1370 DISKTRWAACLDAVVVNPHEAQASLKWGQNCQDYKINFKAETGNFGNQPALKVTANWPKIPSKWK 1434

  Fly  1200 --------------------------SNRLDHLVSALSADKV-DSLHMSQEINISMQTPQDQFRL 1237
                                      |.|...||.|||:.:. |.:.....:.:..:|    .||
 Frog  1435 STGKAVAHYVPGGMYMLGFQGEYRRNSQRQVKLVFALSSPRTCDVVIQMPRLTVYYRT----MRL 1495

  Fly  1238 AVEV---NGVKWRFHQIPFFYKLDSKFDASHELTFDSGLKRSCSVINGIVNTFDDYLINLREIAV 1299
            .|.:   :..|....|.|.:    :.|..:.::..|| ::..|.|....:.||:.  |:|.. |:
 Frog  1496 PVPIPVGHHAKENVLQTPTW----NIFAEAPQIVMDS-IQGECKVGQDQITTFNG--IDLAS-AL 1552

  Fly  1300 RPDCLTLLVADCSPLPQIAVFVTPSPVQGLSTNY-GLRVHIGQNYFNFRARTDNSSLPTDEPVLI 1363
            ..:|..:|..|||...:..|.:..|..   |.|: ...|.:|....:.....|:..:..:.   |
 Frog  1553 PENCYHVLAQDCSHELKFMVLMRNSKE---SPNHKAFNVKLGAYDIDMYYSADSLKMKING---I 1611

  Fly  1364 YLNQDQTPHNVRKKPYQWPIETSDYDFRVEL-NEQNILIVECTQLSSTIQFDLYNILNFEIYGV- 1426
            .|::::.|:    |.:.:|        .||: .|.|.:::...:..  |.|..|:.|..::... 
 Frog  1612 ELSEERLPY----KSFDYP--------TVEIKKEGNGVLLSAPEYG--IDFINYDGLTLKMRPAL 1662

  Fly  1427 -YKHQMCGLC 1435
             .|.:.||:|
 Frog  1663 WMKGKTCGIC 1672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-dNP_732076.1 LPD_N 28..589 CDD:214755 128/658 (19%)
DUF1943 632..>813 CDD:286281 34/238 (14%)
VWD 1277..1435 CDD:295339 35/161 (22%)
vtga2XP_002931744.3 Vitellogenin_N 24..594 CDD:396081 128/667 (19%)
DUF1943 628..911 CDD:401204 45/308 (15%)
DUF1944 1331..1496 CDD:401207 25/168 (15%)
VWD 1525..1688 CDD:214566 38/172 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D25081at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23345
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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