DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp45 and AT3G53270

DIOPT Version :10

Sequence 1:NP_650499.1 Gene:Pbp45 / 41920 FlyBaseID:FBgn0038371 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_566983.1 Gene:AT3G53270 / 824494 AraportID:AT3G53270 Length:280 Species:Arabidopsis thaliana


Alignment Length:336 Identity:66/336 - (19%)
Similarity:115/336 - (34%) Gaps:96/336 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MELNIFD-DCWELVQRFQRLVNDGENCEFEVFCRCWRELQLQHLFTAQTNHTEVIATTLAALHVA 64
            |.|:.|. |..||:..|   |.| :...|......|...:..|::.|..|..  :|..:.:|:| 
plant     1 MNLSPFKRDIDELIDEF---VED-DLTTFADMKSVWLSRKFSHIYEASPNSN--LAFFMQSLYV- 58

  Fly    65 KRLSCSRRTTGDVFPA-SRAQRIGGFFLLYVIYYKQPTHNFIKIEVSPRTWQELTDYALDLRKDS 128
                   .|.|.:... |.::|:||.:.||.::..||.....:|.:|.:...:..|..::.:...
plant    59 -------HTIGHMVSIDSFSRRLGGLYCLYCLHEIQPFKPKFRIYISLQELGKFRDLVVEAKDKG 116

  Fly   129 PERKDTHQIAYMLWRLTQEQAFRFTALDYCQGLDNLVDYDRVETVAGAKEQRQSALMQKQQRANG 193
            .|      ||         .|.....||     :|::.:..|:..:..|...|...:|..:    
plant   117 VE------IA---------AAVAKKMLD-----ENMLIFGAVDETSATKTIHQLTELQNAR---- 157

  Fly   194 VSLTYE-------LEGLRALDQASQ----PLCELEAAYNAQKKQLAAGHEHALPPSQIFGHLREV 247
            |...||       :.....||...:    .|.::...|...||:...|          .|.:.|:
plant   158 VRFAYEKLICDTSINQFIHLDMGKEVDLNSLDKMSIEYAEAKKRAVEG----------AGEIMEI 212

  Fly   248 -----FADIQSVLGAR----------------KSTPDENCTTTSTGNQLEVRQRVRNKAMYGVEE 291
                 .::.:.::|.|                :.|..:..|||.             |.:..||.
plant   213 DDIKHISEEKELMGERMEKLKEEWDSQRLYFYEQTKLDGFTTTP-------------KQLTNVEH 264

  Fly   292 REPQNQADELE 302
            .| .:..|||:
plant   265 DE-DDGFDELD 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp45NP_650499.1 SNAPC1 5..214 CDD:430842 44/221 (20%)
AT3G53270NP_566983.1 SNAPC1 6..199 CDD:430842 46/230 (20%)

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