DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp45 and SNAPC1

DIOPT Version :10

Sequence 1:NP_650499.1 Gene:Pbp45 / 41920 FlyBaseID:FBgn0038371 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_003073.1 Gene:SNAPC1 / 6617 HGNCID:11134 Length:368 Species:Homo sapiens


Alignment Length:368 Identity:75/368 - (20%)
Similarity:139/368 - (37%) Gaps:80/368 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DCWELVQRFQRLVNDGENCEFEVFCRCWRELQLQHLFTAQTNHTEVIATTLAALHVAKRLSCSRR 72
            ||..|:.|||    :.::..||.|...||.::...:|..:..:.|....|..||.:|.|....  
Human    10 DCEALLSRFQ----ETDSVRFEDFTELWRNMKFGTIFCGRMRNLEKNMFTKEALALAWRYFLP-- 68

  Fly    73 TTGDVFPASRAQRIGGFFLLYVIYYKQPTHNFIKIEVSPRTWQELTDYALDLRKDSPERKDTHQI 137
                  |.:...|:|..:|||.:|..|......||.|:.:.|.|:..:..||     ........
Human    69 ------PYTFQIRVGALYLLYGLYNTQLCQPKQKIRVALKDWDEVLKFQQDL-----VNAQHFDA 122

  Fly   138 AYMLWRLTQEQAFRFTALDYCQGLDNLVDYDRVETVAGAKEQRQSALMQKQQRANGVSLTYELEG 202
            ||:..:|..::||.|||      :..|:.|               .:.:|..||. |:..::...
Human   123 AYIFRKLRLDRAFHFTA------MPKLLSY---------------RMKKKIHRAE-VTEEFKDPS 165

  Fly   203 LRALDQASQPLCELEAAYNAQKKQLAAGHEHALPPSQIFGHLREVFADIQSVLGARKSTPDENCT 267
            .|.:...:..:  ||...|.        |:|              :.:::.|:...||.||:..:
Human   166 DRVMKLITSDV--LEEMLNV--------HDH--------------YQNMKHVISVDKSKPDKALS 206

  Fly   268 TTSTGNQLEVRQRVRNKAMYGVEEREP--QNQADELEVQLEVN----ETYQRRMSSATV----FQ 322
            .........::..|.....:..:.:.|  :::.::.|.::|.|    |..:|..|.|.:    |.
Human   207 LIKDDFFDNIKNIVLEHQQWHKDRKNPSLKSKTNDGEEKMEGNSQETERCERAESLAKIKSKAFS 271

  Fly   323 RELPADVQQEYEMIEF-SDDEEMEVGESE------EVTEEELK 358
            ..:.|...:.:..::. |.|.:...|:.:      :..:|.||
Human   272 VVIQASKSRRHRQVKLDSSDSDSASGQGQVKATRKKEKKERLK 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp45NP_650499.1 SNAPC1 5..214 CDD:430842 48/205 (23%)
SNAPC1NP_003073.1 SNAPC3-binding 1..168 47/196 (24%)
SNAPC1 7..191 CDD:430842 53/243 (22%)
SNAPC4-binding 164..268 20/127 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 224..257 5/32 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..368 7/40 (18%)

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