DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp45 and SNAPC1

DIOPT Version :9

Sequence 1:NP_650499.1 Gene:Pbp45 / 41920 FlyBaseID:FBgn0038371 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_003073.1 Gene:SNAPC1 / 6617 HGNCID:11134 Length:368 Species:Homo sapiens


Alignment Length:368 Identity:75/368 - (20%)
Similarity:139/368 - (37%) Gaps:80/368 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DCWELVQRFQRLVNDGENCEFEVFCRCWRELQLQHLFTAQTNHTEVIATTLAALHVAKRLSCSRR 72
            ||..|:.|||    :.::..||.|...||.::...:|..:..:.|....|..||.:|.|....  
Human    10 DCEALLSRFQ----ETDSVRFEDFTELWRNMKFGTIFCGRMRNLEKNMFTKEALALAWRYFLP-- 68

  Fly    73 TTGDVFPASRAQRIGGFFLLYVIYYKQPTHNFIKIEVSPRTWQELTDYALDLRKDSPERKDTHQI 137
                  |.:...|:|..:|||.:|..|......||.|:.:.|.|:..:..||     ........
Human    69 ------PYTFQIRVGALYLLYGLYNTQLCQPKQKIRVALKDWDEVLKFQQDL-----VNAQHFDA 122

  Fly   138 AYMLWRLTQEQAFRFTALDYCQGLDNLVDYDRVETVAGAKEQRQSALMQKQQRANGVSLTYELEG 202
            ||:..:|..::||.|||      :..|:.|               .:.:|..||. |:..::...
Human   123 AYIFRKLRLDRAFHFTA------MPKLLSY---------------RMKKKIHRAE-VTEEFKDPS 165

  Fly   203 LRALDQASQPLCELEAAYNAQKKQLAAGHEHALPPSQIFGHLREVFADIQSVLGARKSTPDENCT 267
            .|.:...:..:  ||...|.        |:|              :.:::.|:...||.||:..:
Human   166 DRVMKLITSDV--LEEMLNV--------HDH--------------YQNMKHVISVDKSKPDKALS 206

  Fly   268 TTSTGNQLEVRQRVRNKAMYGVEEREP--QNQADELEVQLEVN----ETYQRRMSSATV----FQ 322
            .........::..|.....:..:.:.|  :::.::.|.::|.|    |..:|..|.|.:    |.
Human   207 LIKDDFFDNIKNIVLEHQQWHKDRKNPSLKSKTNDGEEKMEGNSQETERCERAESLAKIKSKAFS 271

  Fly   323 RELPADVQQEYEMIEF-SDDEEMEVGESE------EVTEEELK 358
            ..:.|...:.:..::. |.|.:...|:.:      :..:|.||
Human   272 VVIQASKSRRHRQVKLDSSDSDSASGQGQVKATRKKEKKERLK 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp45NP_650499.1 SNAPc_SNAP43 5..214 CDD:286846 48/205 (23%)
SNAPC1NP_003073.1 SNAPC3-binding 1..168 47/196 (24%)
SNAPc_SNAP43 7..191 CDD:313098 53/243 (22%)
SNAPC4-binding 164..268 20/127 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 224..257 5/32 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..368 7/40 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165160529
Domainoid 1 1.000 52 1.000 Domainoid score I11528
eggNOG 1 0.900 - - E1_KOG4746
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1269640at2759
OrthoFinder 1 1.000 - - FOG0006114
OrthoInspector 1 1.000 - - oto91808
orthoMCL 1 0.900 - - OOG6_107544
Panther 1 1.100 - - LDO PTHR15131
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3936
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.740

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