DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp45 and snapc1a

DIOPT Version :9

Sequence 1:NP_650499.1 Gene:Pbp45 / 41920 FlyBaseID:FBgn0038371 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_956557.1 Gene:snapc1a / 393233 ZFINID:ZDB-GENE-040426-1031 Length:349 Species:Danio rerio


Alignment Length:353 Identity:85/353 - (24%)
Similarity:141/353 - (39%) Gaps:79/353 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DCWELVQRFQRLVNDGENCEFEVFCRCWRELQLQHLFTAQTNHTEVIATTLAALHVAKRLSCSRR 72
            ||.||:.|||.    .|:..||||...||||....:|...::.:|..:.|        ||:.:..
Zfish    18 DCEELLGRFQL----SESVRFEVFSAIWRELDFSSVFFGISSKSEKRSFT--------RLTLTTA 70

  Fly    73 TTGDVFPASRAQRIGGFFLLYVIYYKQPTHNFIKIEVSPRTWQELTDYALDLRKDSPERKDTHQI 137
            .:..:.|.|...|:|..:|:|.:||.||.....||.::.:.|.:|.....|.:  |.:..|   |
Zfish    71 YSYLLPPYSFQIRVGALYLIYGLYYMQPAWPKEKIRIALKDWYDLQKLVADAK--SCQHLD---I 130

  Fly   138 AYMLWRLTQEQAFRFTAL-----------------DYCQGLDNLVD-------YDRVETVAGAKE 178
            .|:..||..|:||.||||                 :..:|..:.|.       .|.:..|.|..|
Zfish   131 VYIFKRLLLEKAFYFTALPKKLTFQSSERIQHHVNEEFRGCRDAVGEVASVEMLDEIANVHGHYE 195

  Fly   179 QRQSALMQKQQRANGVSLTYELEGLRALDQASQPLCELEAAYNAQKKQLAAGHEHALPPSQIFGH 243
            :.:...:........::||         |....  |.||  |...::::||..:.....::....
Zfish   196 RLKKLSLPTSLGVTLINLT---------DSIGH--CVLE--YRKWQEEIAAAKKKDFKQNETTQK 247

  Fly   244 LR-----EVFADIQSV--------LGARKSTPDENCTTTSTG-NQLEVRQRVRNKAM-------Y 287
            ..     ::.|.|:|.        ..:|:..|.|..||:::| :|..::..||..::       :
Zfish   248 SESTSRADMLAAIKSKSCSHASKGTRSRRHRPVEIATTSNSGSDQALLKSHVRPPSLKTRTYNHF 312

  Fly   288 GVEEREPQNQADELEVQLEVNETYQRRM 315
            | :..||:...|.|   |.|.|...|.:
Zfish   313 G-KPGEPEQTKDWL---LSVKEEDTRAL 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp45NP_650499.1 SNAPc_SNAP43 5..214 CDD:286846 58/229 (25%)
snapc1aNP_956557.1 SNAPc_SNAP43 15..198 CDD:286846 55/196 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596930
Domainoid 1 1.000 65 1.000 Domainoid score I10053
eggNOG 1 0.900 - - E1_KOG4746
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1269640at2759
OrthoFinder 1 1.000 - - FOG0006114
OrthoInspector 1 1.000 - - oto39640
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15131
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3936
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.840

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