DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pbp45 and R05F9.11

DIOPT Version :9

Sequence 1:NP_650499.1 Gene:Pbp45 / 41920 FlyBaseID:FBgn0038371 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_494896.2 Gene:R05F9.11 / 187618 WormBaseID:WBGene00019894 Length:525 Species:Caenorhabditis elegans


Alignment Length:337 Identity:62/337 - (18%)
Similarity:115/337 - (34%) Gaps:114/337 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LFTAQTNHTEVIATTLAALHVAKRLSCSRRTTGDVFPASRAQRIGGFFLLYVIYYKQPTHNFIKI 107
            :|..::..:|:|......|  .:.||..........|.|..:|:.|.:.||..::.|...:.::|
 Worm    50 IFNGRSESSEIIEFNEHLL--VQCLSYMEEEACPGMPRSLKERLFGLYSLYTFFFIQQESHVVQI 112

  Fly   108 EVSP---RTWQELTDYALDLRKDSPERKDTHQI--AYMLW-RLTQEQAFRFTAL----DYCQGLD 162
            .::|   |.:::...:.|           ..:|  ||::. :|.|....:..|.    |.|....
 Worm   113 RMNPDCARNFRKFAQFLL-----------VEKIYDAYVVCKKLLQNNTIKHVAFLSIHDPCYAKS 166

  Fly   163 NLVDYDRVETVAGAKEQRQSALMQKQQRANGVSLTYELEGLRALDQASQPLCELEAAYNAQKKQL 227
            |                      |..::::||.:         |...:.|||.:: |...|...|
 Worm   167 N----------------------QTDEKSHGVPV---------LANLNDPLCRVK-ALTEQFDML 199

  Fly   228 AAGHEHALPPSQIFGHLREVFADIQSVLGARKSTPDENCTTTSTGNQL----EVRQRVRNKAMYG 288
            ...|..       :..|::.|.                    .|||.|    |:..||..|.:..
 Worm   200 GVIHRE-------YSKLKDKFG--------------------ITGNPLNDPTEILSRVIEKNLKA 237

  Fly   289 VEEREPQNQADELEVQLEVNETYQRRMSSATVFQRELPADVQQEYEMIEFSDDEEME----VGES 349
            :|:       ..:|...:|::..|..:.:       |.:|          .||||.|    :.|:
 Worm   238 IED-------SAIEKVFDVDQDEQSSVDA-------LSSD----------GDDEETEKDPDIAEN 278

  Fly   350 EEVTEEELKAIL 361
            ::..||.::..|
 Worm   279 DDNVEETIEPSL 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp45NP_650499.1 SNAPc_SNAP43 5..214 CDD:286846 31/180 (17%)
R05F9.11NP_494896.2 SNAPc_SNAP43 16..210 CDD:286846 37/211 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160168002
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4746
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15131
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

Return to query results.
Submit another query.