DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pbp45 and snpc-1.3

DIOPT Version :9

Sequence 1:NP_650499.1 Gene:Pbp45 / 41920 FlyBaseID:FBgn0038371 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_001023773.1 Gene:snpc-1.3 / 178929 WormBaseID:WBGene00017265 Length:426 Species:Caenorhabditis elegans


Alignment Length:411 Identity:90/411 - (21%)
Similarity:138/411 - (33%) Gaps:121/411 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 ELQLQHLFTAQTNHTEVIATTLAALHVAKRLSCSRRTTGDV---FPASRAQRIGGFFLLYVIYYK 98
            |...|||...|.::.:..:..:...:....::|......:|   .|.|..:::.|.:.||..:|.
 Worm    39 EKLFQHLGMIQLHNGKFESAQIIEFNEQLLVNCLTYMEENVCVGVPRSLEEQLFGLYSLYTFFYT 103

  Fly    99 QPTHNFIKIEVSPRT---WQELTDYALDLRKDSPERKDTHQIAYMLWRLTQEQAFRFTALDYCQ- 159
            |.:.:.:||.|.|.|   :..||...||     .:..|.:.|..   :|.::|||:|.|..:.. 
 Worm   104 QVSGHAVKIRVEPDTVLNFSRLTQLVLD-----EKIYDAYAICQ---KLLEDQAFKFVAFLHAND 160

  Fly   160 -------GLDN--------------------LV-------------DYDRVETVAGAKEQRQSAL 184
                   |.||                    ||             :|.|::..||....| ..|
 Worm   161 PTLFKRFGQDNEANPAKTLVNLNDPLGRFKALVESPVFAKLGLIHNEYARLKEEAGIVLDR-FPL 224

  Fly   185 MQKQQRANGV--SLTYELEGLRALD----QASQPLCEL--------EAAYNAQKKQLAAGHEHAL 235
            :..|:....:  ....||:|..:|.    .:|.|||..        |.||.:..| |.....|..
 Worm   225 LNIQETCKKILEKGADELKGQLSLQIQSANSSSPLCSTPPTRSEIKEKAYGSGLK-LTRSRRHCT 288

  Fly   236 P-----PSQIFGHLREVFADIQSVLGARKSTPDENCTTTSTGNQLEVRQRVRNKAMYGVEEREPQ 295
            .     ||..||     |..|.||        ||...|..           |.|.:.|.....|:
 Worm   289 TSVTKLPSVKFG-----FKSIDSV--------DEISKTAK-----------RRKVVDGGAPSIPK 329

  Fly   296 NQADELEVQLEVNETYQRRMSS------------ATVFQRELPADVQQEYEM-----IEFSDDEE 343
            :  |.|.....|..:.|::.||            |...:..:|.|:.|....     :|..|.|.
 Worm   330 D--DILPSNPPVKRSRQKKSSSIPKTACPEILLAAEEKKNAVPDDILQLASSKPAINLESGDAEV 392

  Fly   344 MEVGE--SEEVTEEELKAILD 362
            :..|.  ||.:..:|.....|
 Worm   393 LSNGRSCSEPLYNDESNGNFD 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp45NP_650499.1 SNAPc_SNAP43 5..214 CDD:286846 49/229 (21%)
snpc-1.3NP_001023773.1 SNAPc_SNAP43 16..212 CDD:286846 38/180 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160168003
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15131
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3936
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.060

Return to query results.
Submit another query.