DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spn-E and Dqx1

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_291084.1 Gene:Dqx1 / 93838 MGIID:2136388 Length:718 Species:Mus musculus


Alignment Length:695 Identity:158/695 - (22%)
Similarity:268/695 - (38%) Gaps:167/695 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 YYKKFRFNLNRDKNLSIYAKREEILAAINAHP--VVIIKGETGCGKTTQVPQ----YILDEAYKS 159
            ||:.    |.:.:.|.|:|.|...|..:.:.|  ||::.|:.|.||:||:||    :.|...:::
Mouse    32 YYEL----LEQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQT 92

  Fly   160 GKYCNIVVTQPRRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLED-----TRLLYCTTGVL 219
            |:   :.||||..:||:|:|:||..|    .:.....::|...|.  ||     |.|.:|...:.
Mouse    93 GQ---VTVTQPYPLAAMSLASRVADE----MDLTLGHEIGYSIPQ--EDCTGPNTMLRFCWDRLF 148

  Fly   220 LNNLINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYFT 284
            |..:.:.:....::.::|||..||....|.|..::|.                           |
Mouse   149 LQEVASTRGPGAWSVLILDEAQERSVASDLLQGLLRD---------------------------T 186

  Fly   285 TTNSIP----PVITTNHRRKHSIEKFYRDQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIID 345
            ...::|    .|:.|:...:...:.|         |....:  .:||.........|.|..|..|
Mouse   187 RLRNLPGDPRVVVVTDPALEPKFQAF---------WGNSPI--VRVPREPGGDPTLAYKDTVPTD 240

  Fly   346 NMER--KAAIQSRQSYDEALRYGAVLIFLPGIYEIDTMAENLTCMLENDPNIKVSIVRCFSLMTP 408
            .:|.  :|.::..|. :||  .|.||::||...||....|:|:..:.             :|..|
Mouse   241 LVEAACQAVLELCQQ-EEA--PGDVLVYLPSEEEISLCCESLSGEMG-------------TLAVP 289

  Fly   409 ENQRDVFNPPP------PG---------------FRKIILTTNIAESSITVPDVSYVIDFCLAKV 452
                   .|||      ||               .|||::|..:|:.|.::|.:.:|||..|...
Mouse   290 -------GPPPRVLPLHPGCAQAIQTVYEDTDVSVRKIVVTHWLADFSFSLPSIQHVIDSGLELR 347

  Fly   453 KVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQN 517
            .|.:......|..|...||.....|..|......|...|:.:|...:.|.|....|::....|.:
Mouse   348 SVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKSTLELEAPPLPHPKVCEENLSS 412

  Fly   518 SVLKAKVLNMGSPVEILALALSPPNLSDIHNTILLLKEVGAL-YLTVDGIYDPLDGDLTYWGTIM 581
            .||......:..|.|...|....|.        .|::.:..| ||.  .:.|  ||:|:..|.|:
Mouse   413 LVLLLMRKQIAEPGECHFLDRPAPE--------ALMRALEDLDYLA--ALND--DGELSDLGVIL 465

  Fly   582 SRLPLDTRQSRLIILGYIFNMLEEAIIIAA------GLSTPGLFAHEGGRSQLGDSFWMHYIFSD 640
            |..||....::.::....||.::|.:.:||      |.:.|.|.|.|....:..:       .:|
Mouse   466 SEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRPPLSAGEAALRRALE-------HAD 523

  Fly   641 GSGSDLVAIWRVYLTYLNIVENGHD----QESAIRWAKRFHVSLRSLKEIHLLVQELRVRCTHLG 701
            |..|.|:.::..:      |::|.|    |...:.|.     ||...:::...:.||..|     
Mouse   524 GDHSSLIQVYEAF------VQSGADEAWCQARGLNWE-----SLCQARKLRAELVELMQR----- 572

  Fly   702 LIPFPVNPNQMMDDREKAIMLKVIIAGAFYPNYFTRSKESCADTD 746
             |..|::......::.:..:.|.:::|     ||.:   ...|||
Mouse   573 -IELPLSQPAFGSEQNRRDLQKALLSG-----YFLK---VARDTD 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 145/632 (23%)
TUDOR 892..1016 CDD:395449
Dqx1NP_291084.1 HrpA 9..672 CDD:224557 158/695 (23%)
DEAQ box 167..170 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 690..718
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.