DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-E and FAS4

DIOPT Version :10

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_174605.1 Gene:FAS4 / 840232 AraportID:AT1G33390 Length:1237 Species:Arabidopsis thaliana


Alignment Length:736 Identity:171/736 - (23%)
Similarity:276/736 - (37%) Gaps:241/736 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LNGTLLNEQ--PQGKRIRT-LDDLDTDDEGEETEIRRDDEYYKKFRFNLNRDKNLSIYAKREEIL 125
            ::|.:.||.  .||.|:.. :..:....|.|||.                  |:|.|....:||:
plant   205 MDGLIENEDVTVQGPRVPAFVVHVSRPAEVEETR------------------KDLPIVMMEQEIM 251

  Fly   126 AAINAHPVVIIKGETGCGKTTQVPQYILDEAYKSGKYCN----IVVTQPRRIAAISIANRVCQER 186
            .|||.||.|||.|:|||||||||||::.:..:.|.::.:    |.:|||||:|.::.|.||..|.
plant   252 EAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGIIGITQPRRVAVLATAKRVAFEL 316

  Fly   187 EWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHERDQNMDFLL 251
            ..:......|||...:... |::.:.:.|.|:||..:.|:..|..|:.|:|||.|||..|.|.|:
plant   317 GVRLGKEVGFQVRYDKKIG-ENSSIKFMTDGILLREIQNDFLLRRYSVIILDEAHERSLNTDILI 380

  Fly   252 IVVRRLLATNSRH----------------------VKIILMSATIDAKELSDYFTTTNSIPPVIT 294
            .::.|::.....:                      :|:||||||:..::.........:|||:| 
plant   381 GMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQITPLKLILMSATLRVEDFVSGKRLFPNIPPLI- 444

  Fly   295 TNHRRKHSIEKFYRDQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIIDNMERKAAIQSRQSY 359
                                     :|..:|.| :..| :....:|:..|....:|.     .|.
plant   445 -------------------------EVPTRQYP-VTIH-FSKKTEIVDYIGEAYKKV-----MSI 477

  Fly   360 DEALRYGAVLIFLPGIYEIDTMAENL--------------------TC----------------- 387
            .:.|..|.:|:|:.|..|:|.:.|.|                    .|                 
plant   478 HKKLPQGGILVFVTGQREVDYLCEKLRKSSKELVVQAAKRDAYVKKKCDDGSFGGVDMKEIAEAF 542

  Fly   388 ----------------------------------MLENDPNI----------------------- 395
                                              |.|:|.:.                       
plant   543 DDDSNNQNSRFSSHGEDPSDIGDGNYDDDFEEEDMYESDEDRDWETVDDGFASSFVEEGKLDALR 607

  Fly   396 --------------------------------------KVSIVRCFSLMTPENQRDVFNPPPPGF 422
                                                  |:.::..:::::|..|..||.......
plant   608 AAFNALADKNGSVSAEPAKSIAAENQEAEQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEE 672

  Fly   423 RKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSG 487
            |.:::.||:||:|:|:|.:.||:|....|||..|:.:...|..:.|.|:|:..|||||.||...|
plant   673 RLVVVATNVAETSLTIPGIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPG 737

  Fly   488 RVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILALALSPPNLSDIHNTILL 552
            ..||:.:...:.....|..:||::::|:...:|..|.:|: ..||..... :||..|.|......
plant   738 HCYRLYSSAVFSNIFEESSLPEIMKVPVDGVILLMKSMNI-PKVENFPFP-TPPEPSAIREAERC 800

  Fly   553 LKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFNMLEE------------ 605
            ||.:.||         ..:|.||..|..||..|:..|.||:::.  :..||:|            
plant   801 LKALEAL---------DSNGGLTPLGKAMSHYPMSPRHSRMLLT--VIQMLKETRNYSRANLILG 854

  Fly   606 ---AIIIAAGLSTPGLFAHEG 623
               |.:.|..|..|.:...||
plant   855 YAVAAVAALSLPNPLIMEFEG 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 114..>697 CDD:441249 160/683 (23%)
DEXHc_TDRD9 115..295 CDD:350746 69/205 (34%)
TUDOR 892..1016 CDD:425754
FAS4NP_174605.1 HrpA 240..>834 CDD:441249 151/638 (24%)
HA2 797..920 CDD:461295 23/90 (26%)
OB_NTP_bind 1011..1085 CDD:400182
Blue background indicates that the domain is not in the aligned region.

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