DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-E and AT2G47680

DIOPT Version :10

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_182290.1 Gene:AT2G47680 / 819381 AraportID:AT2G47680 Length:1015 Species:Arabidopsis thaliana


Alignment Length:649 Identity:119/649 - (18%)
Similarity:206/649 - (31%) Gaps:202/649 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GNSWDTCELPRYDVWDEELFGY---------------------LNPNENPLKKCDTSFKPLTKLE 92
            |||:|.....:.||.:..|..:                     |.|.|..:.:|....|||    
plant   176 GNSYDFSGWAQLDVRESHLRSHAGLPGIPDYRVQICTQPQPQSLMPGERLVLECAAVGKPL---- 236

  Fly    93 NSKWGVTFAHNLTCRARCHTRKRDKENLVGNWTYTPGKINCEILET-VCAEKGGEQRDVYGYLHS 156
              .|...:.:.:..:.  .|:|:          ||...::.|.... .|....|.:.::...:..
plant   237 --PWYQWYRNAVAIKD--GTKKQ----------YTVSSVSAEHQGLYYCQVTNGNESELSREVEV 287

  Fly   157 QIIPTKPKLSRTNADLKEYDVFVILLDSLSYSQAARSLPRTVSFFKSYMKGIIFPYMNKVGDNSR 221
            .::.||...:.|..:..|.::.|     |:.|:....                        |...
plant   288 VVLGTKKLWTNTAVECTEEELKV-----LTISETGNE------------------------DLFA 323

  Fly   222 PNGVALWFGKLLEKVDRFIFDKPSLEADWTDDY-FCNVFKDNE---TSLFD----EFKTHGYKTL 278
            .:.|||..|.:..|      ..|.|:|...|.| ..|:.:..:   .||.|    |.|:...:.|
plant   324 VDKVALLIGNMSYK------HHPQLKAPMVDVYELTNLLRQLDFKVVSLLDLTELEMKSAVNEFL 382

  Fly   279 MAEDWALGTLIWPNCLGYRNQSIDHYMRPFQLAHEKYGTPVTREHLNGSLC--------REDHNT 335
            :..|..:..|::....||.|.. :.:|.|..       .|....|.| .||        :|....
plant   383 LLLDKGVYGLLYYAGHGYENYG-NSFMVPID-------APKPYRHTN-CLCVQKILKLMQEKETG 438

  Fly   336 LLDYLAQFLDAYSGSNDSIQLKREKSPNSPDQRKFAFLWTTRLGHATENGFDATE-------NGS 393
            |..:|.......:..:|:|.:.......:    ...|      |:||..|.:|.|       || 
plant   439 LNVFLLDMCRKRNQYDDTILILESLKVTA----NIVF------GYATCQGAEAFEIQYPDLANG- 492

  Fly   394 DNDFLNFFIKHRKK--LEDSFVLLLGDH------------GFRLGGVRNTAVGAIDVNNPL--TA 442
                  .|:|..||  ||:..:.:|.|.            |.:...:|::......:.:|:  ||
plant   493 ------IFMKFLKKRLLENKKITVLLDQVAEDMGKCQLTKGMQALEIRSSLSEKRALTDPIRQTA 551

  Fly   443 ISVPNSLRTNTDILKILNMNSEKLQTHFDTRATILDILKFQPAEKFSAITPLQIPGEKGQSHLRN 507
            .| |..|..|....|...: .|.:...||....    :|...|.:||.:..:             
plant   552 CS-PEGLARNLQWAKAHEL-PESMAIEFDCGVK----MKLGFAAEFSNVMII------------- 597

  Fly   508 QPPFNRNCQTMPIPFEYCICQFNKTSVPINSTIS-MEIGEKVAENVNKLL------QINNFT--- 562
               :.|..:.   |.|...|..:.|..|::..:. .|..:...|.....|      :..::|   
plant   598 ---YTRITEK---PAEIIHCNASITDFPLDLNVDPKETNKGTPEETGSFLVSKELPKYGSYTRLS 656

  Fly   563 -----------SECISMVFERTESLLQYNQKLGNSTIYTVIAQMKKPSEAK------FKATVKI 609
                       :.|:|.:::..|..|..|:::          .:.||..||      ||..:.:
plant   657 SLQTLKENLTFTVCLSYMYQGIEETLDENKRV----------DVGKPLIAKLDIHSGFKRNLSV 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 114..>697 CDD:441249 103/563 (18%)
DEXHc_TDRD9 115..295 CDD:350746 32/188 (17%)
TUDOR 892..1016 CDD:425754
AT2G47680NP_182290.1 HrpA 24..>482 CDD:441249 69/377 (18%)
DEXHc_RHA-like 42..188 CDD:438707 4/11 (36%)
YTH1 624..>779 CDD:227416 15/97 (15%)
Blue background indicates that the domain is not in the aligned region.

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