DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spn-E and AT2G35920

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_001323636.1 Gene:AT2G35920 / 818165 AraportID:AT2G35920 Length:1027 Species:Arabidopsis thaliana


Alignment Length:845 Identity:254/845 - (30%)
Similarity:391/845 - (46%) Gaps:169/845 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 DTDDEGEETEIRRDDEYYK--------KFRFNLN------------------RDKNLSIYAKREE 123
            |..|......::|.|...|        ||.|.|.                  |:| |..:..:||
plant   205 DQQDRTSTLGLKRPDSASKLPDSLEKEKFSFALKERQEKLKATESVKALKAFREK-LPAFKMKEE 268

  Fly   124 ILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKS--GKYCNIVVTQPRRIAAISIANRVCQER 186
            .|.:::.:.|:::.||||||||||:||:||:|...|  |..|||:.||||||:|||:|:|:..||
plant   269 FLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVASRISAER 333

  Fly   187 EWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHERDQNMDFLL 251
            .........:|:.|....| :.||||:|||||||..||.:..||:.:|:::||:|||..|.||||
plant   334 GESIGESVGYQIRLESKRS-DQTRLLFCTTGVLLRRLIEDPNLTNVSHLLVDEIHERGMNEDFLL 397

  Fly   252 IVVRRLLATNSRHVKIILMSATIDAKELSDYF--TTTNSIP----PVI----------------- 293
            |::|.||.... .:::|||||||:|...|.||  :.|..||    ||.                 
plant   398 IILRDLLPRRP-DLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLEKSRYNIKS 461

  Fly   294 --------TTNHRRKHSIEKFYRDQLGSIIWNEEDVGHQQVPEINKH--GYRAAVKIIVIIDNME 348
                    ::..||:.|..|  :|.|.::.   ||:      :||.|  .|.:|.:     :::|
plant   462 SDSGNYQGSSRGRRRESESK--KDDLTTLF---EDI------DINSHYKSYSSATR-----NSLE 510

  Fly   349 RKAAIQSRQSYDEA-LRY-------GAVLIFLPGIYEIDTMAENLTCMLENDPNIKVSIVRCFSL 405
            ..:..|......|| :.:       ||:|:||.|..||..:.|.:........:.|..::.....
plant   511 AWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGS 575

  Fly   406 MTPENQRDVFNPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWAS 470
            |...|||::|:.|||..|||:|.|||||||||:.||.||:|...||....|..:..:.|..:|.|
plant   576 MPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWIS 640

  Fly   471 KANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILA 535
            ||:..||.||.||:::|..||:..|..|. ..|::.:||::|.|||...|..|.|.:||....||
plant   641 KASAHQRRGRAGRVQAGVCYRLYPKVIYD-AFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLA 704

  Fly   536 LALSPPNLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIF 600
            .||.||:...:.|.|.|||.:|||        :.:: :||..|..:..||:|....:::::|.||
plant   705 KALQPPDALAVENAIELLKTIGAL--------NDVE-ELTPLGRHLCTLPVDPNIGKMLLIGAIF 760

  Fly   601 NMLEEAIIIAAGLSTPGLFAHEGGRSQLGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNIVENGHD 665
            ..:..|:.|||.|:....|.....|.:..|....:  |:..|.||.:|:.:.|..|.:....|::
plant   761 QCVNPALTIAAALAYRSPFVLPLNRKEEADEAKRY--FAGDSCSDHIALLKAYEGYRDAKRGGNE 823

  Fly   666 QESAIRWAKRFH-VSLRSLKEIHLLVQELRVRCTHLGLI--PFPVNPNQMMDDREKAIMLKVIIA 727
            ::..  |..... |:||.::::.....:|   .:.:|.:  ..|...||...|.|   |:..::.
plant   824 KDFC--WQNFLSPVTLRMMEDMRNQFLDL---LSDIGFVDKSKPNAYNQYSYDME---MISAVLC 880

  Fly   728 GAFYPN------------YFTRS-------------------------KESCADTDRNIYQTISG 755
            ...|||            ::|:.                         .|....|...|..:.:.
plant   881 AGLYPNVVQCKRRGKRTAFYTKELGKVDIHPGSVNARVNLFSLPYLVYSEKVKTTSVYIRDSTNI 945

  Fly   756 HDPCRTVYFTNFKPAYMGE--------LY---TRRIKELFQEVR----------IPPENMDVTFQ 799
            .|....::..|..|:..||        |:   ::.|.||.|.:|          |...::|:|.:
plant   946 SDYALLMFGGNLIPSKTGEGIEMLGGYLHFSASKNILELIQRLRGEVDKLLNKKIEDPSLDITVE 1010

  Fly   800  799
            plant  1011  1010

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 216/627 (34%)
TUDOR 892..1016 CDD:395449
AT2G35920NP_001323636.1 HrpA 225..941 CDD:224557 235/754 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D278674at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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