DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spn-E and dhx38

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:XP_002937626.2 Gene:dhx38 / 734019 XenbaseID:XB-GENE-990308 Length:1212 Species:Xenopus tropicalis


Alignment Length:911 Identity:221/911 - (24%)
Similarity:377/911 - (41%) Gaps:221/911 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DPRLMATKFKSSEVPNRELIGTDYV-----SKIVAKEKCLLNGTLLNEQPQGKRI---------- 78
            |.|::.||.....:|.|:......:     |::|.|.:         ||.:.|:.          
 Frog   402 DGRIVFTKQPEPVIPVRDATSDLAIIARKGSQLVRKHR---------EQKERKKAQHKHWELAGT 457

  Fly    79 ---------RTLDDLD-----------------TDDEGEETEIRRDDEYYKKFRFNLNRDKNLSI 117
                     :.:|:.|                 .|...|.:|...|   :.:.:..:.:.:.|.|
 Frog   458 KLGDIMGVKKQVDEPDKPIAEDGAVDYKAEQKFADHMRERSEASSD---FSRKKSLMEQRQYLPI 519

  Fly   118 YAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKSGKYCNIVVTQPRRIAAISIANRV 182
            :|.::|:|..|..:.:||:.||||.|||||:.||:.::.|..  |..|..|||||:||:|:|.||
 Frog   520 FAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTD--YGMIACTQPRRVAAMSVAKRV 582

  Fly   183 CQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHERDQNM 247
            .:|.:........:.:......| |.|.:.|.|.|:||...:....|.||:.:::||.|||..|.
 Frog   583 SEEMQVSLGEEVGYAIRFEDCTS-EKTLIKYMTDGILLRECLREADLDHYSAVIMDEAHERSLNT 646

  Fly   248 DFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYFTTTNSIP---------PVITTNHRRKHSI 303
            |.|..::|.:: |....:|:|:.|||:||.:.:.:|   .::|         ||           
 Frog   647 DVLFGLLREVV-TRRSDLKLIVTSATMDADKFATFF---GNVPIFYIPGRTFPV----------- 696

  Fly   304 EKFYRDQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIIDNMERKAAIQSRQSYDEALRYGAV 368
                            |:...:.|:  :....|||           |.|:|...|.    ..|.:
 Frog   697 ----------------DILFSKTPQ--EDYVEAAV-----------KQALQIHLSG----AAGDI 728

  Fly   369 LIFLPGIYEIDTMAENLTCMLEN-DPNIKVSIVRCFSLMTPENQRDVFNPPPPGFRKIILTTNIA 432
            |||:||..:|:..::.:...||. |....::::..:|.:..:.|..:|...|.|.||.|:.||||
 Frog   729 LIFMPGQEDIEVTSDQIVERLEELDSAPPLAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIA 793

  Fly   433 ESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHF 497
            |:|:||..:.:|||....|:||.:......:|::...|:||..||:||.||...|:.||:..:..
 Frog   794 ETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCYRLYTQSA 858

  Fly   498 YQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILALALSPPNLSDIHNTILLLKEVGALYLT 562
            |:.|:....:||:.|..|.|.||..|  ::|....:|...:.||...::.|::..|..:|||..|
 Frog   859 YKNELLHTTVPEIQRTNLSNVVLLLK--SLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGALDNT 921

  Fly   563 VDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFNMLEEAIIIAAGLSTPGLFAHEGGRSQ 627
                     |.||..|.:|...|||...|:::|:........|.:|:.:.||.|.:|....||.:
 Frog   922 ---------GALTPTGRLMVEFPLDPALSKMLIVSCDMGCSSEILIVVSMLSVPAIFYRPKGREE 977

  Fly   628 LGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNIVENGHDQESAIRWAKRFHV---SLRSLKEIHLL 689
            ..|.....:...:   ||       :|||||:.....:...:..|..:..:   ::|.::|:...
 Frog   978 ESDQVREKFAVPE---SD-------HLTYLNVFLQWKNNNYSSGWCNQHFIHAKAMRKVREVRAQ 1032

  Fly   690 VQELRVRCTHLGLIPFPVNPNQMMD----DREKAIMLKVIIAGAF-----------YPNYFTRSK 739
            ::::.|              :|.|.    ..:..|:.|.|.|..|           |.|  .|:.
 Frog  1033 LKDIMV--------------SQRMSLSSCGSDWDIVRKCICAAYFHQAARLKGIGEYVN--VRTG 1081

  Fly   740 ESCADTDRNIYQTIS----GHDPCRTVY-------------FTNFKPAYMGEL----YT------ 777
            ..|     :::.|.|    |:.|...||             .|.....::.||    |:      
 Frog  1082 MPC-----HLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGK 1141

  Fly   778 ------RRIKE----LFQEVRIPPENMDVTFQE----------GSQKVFVTFKQDDWIEGSSKYV 822
                  ||.||    :.:|:.:..|.:....:|          .|.|::...::|....|:.:..
 Frog  1142 TRQENRRRAKEEVSAMEEEMMLAEEQLRARREEQEKKNILSSARSLKIYTPGRKDQVEPGTPRRT 1206

  Fly   823 P 823
            |
 Frog  1207 P 1207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 170/596 (29%)
TUDOR 892..1016 CDD:395449
dhx38XP_002937626.2 HrpA 483..1131 CDD:224557 194/743 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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