DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-E and dhx38

DIOPT Version :10

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:XP_002937626.2 Gene:dhx38 / 734019 XenbaseID:XB-GENE-990308 Length:1212 Species:Xenopus tropicalis


Alignment Length:911 Identity:221/911 - (24%)
Similarity:377/911 - (41%) Gaps:221/911 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DPRLMATKFKSSEVPNRELIGTDYV-----SKIVAKEKCLLNGTLLNEQPQGKRI---------- 78
            |.|::.||.....:|.|:......:     |::|.|.:         ||.:.|:.          
 Frog   402 DGRIVFTKQPEPVIPVRDATSDLAIIARKGSQLVRKHR---------EQKERKKAQHKHWELAGT 457

  Fly    79 ---------RTLDDLD-----------------TDDEGEETEIRRDDEYYKKFRFNLNRDKNLSI 117
                     :.:|:.|                 .|...|.:|...|   :.:.:..:.:.:.|.|
 Frog   458 KLGDIMGVKKQVDEPDKPIAEDGAVDYKAEQKFADHMRERSEASSD---FSRKKSLMEQRQYLPI 519

  Fly   118 YAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKSGKYCNIVVTQPRRIAAISIANRV 182
            :|.::|:|..|..:.:||:.||||.|||||:.||:.::.|..  |..|..|||||:||:|:|.||
 Frog   520 FAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTD--YGMIACTQPRRVAAMSVAKRV 582

  Fly   183 CQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHERDQNM 247
            .:|.:........:.:......| |.|.:.|.|.|:||...:....|.||:.:::||.|||..|.
 Frog   583 SEEMQVSLGEEVGYAIRFEDCTS-EKTLIKYMTDGILLRECLREADLDHYSAVIMDEAHERSLNT 646

  Fly   248 DFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYFTTTNSIP---------PVITTNHRRKHSI 303
            |.|..::|.:: |....:|:|:.|||:||.:.:.:|   .::|         ||           
 Frog   647 DVLFGLLREVV-TRRSDLKLIVTSATMDADKFATFF---GNVPIFYIPGRTFPV----------- 696

  Fly   304 EKFYRDQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIIDNMERKAAIQSRQSYDEALRYGAV 368
                            |:...:.|:  :....|||           |.|:|...|.    ..|.:
 Frog   697 ----------------DILFSKTPQ--EDYVEAAV-----------KQALQIHLSG----AAGDI 728

  Fly   369 LIFLPGIYEIDTMAENLTCMLEN-DPNIKVSIVRCFSLMTPENQRDVFNPPPPGFRKIILTTNIA 432
            |||:||..:|:..::.:...||. |....::::..:|.:..:.|..:|...|.|.||.|:.||||
 Frog   729 LIFMPGQEDIEVTSDQIVERLEELDSAPPLAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIA 793

  Fly   433 ESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHF 497
            |:|:||..:.:|||....|:||.:......:|::...|:||..||:||.||...|:.||:..:..
 Frog   794 ETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCYRLYTQSA 858

  Fly   498 YQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILALALSPPNLSDIHNTILLLKEVGALYLT 562
            |:.|:....:||:.|..|.|.||..|  ::|....:|...:.||...::.|::..|..:|||..|
 Frog   859 YKNELLHTTVPEIQRTNLSNVVLLLK--SLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGALDNT 921

  Fly   563 VDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFNMLEEAIIIAAGLSTPGLFAHEGGRSQ 627
                     |.||..|.:|...|||...|:::|:........|.:|:.:.||.|.:|....||.:
 Frog   922 ---------GALTPTGRLMVEFPLDPALSKMLIVSCDMGCSSEILIVVSMLSVPAIFYRPKGREE 977

  Fly   628 LGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNIVENGHDQESAIRWAKRFHV---SLRSLKEIHLL 689
            ..|.....:...:   ||       :|||||:.....:...:..|..:..:   ::|.::|:...
 Frog   978 ESDQVREKFAVPE---SD-------HLTYLNVFLQWKNNNYSSGWCNQHFIHAKAMRKVREVRAQ 1032

  Fly   690 VQELRVRCTHLGLIPFPVNPNQMMD----DREKAIMLKVIIAGAF-----------YPNYFTRSK 739
            ::::.|              :|.|.    ..:..|:.|.|.|..|           |.|  .|:.
 Frog  1033 LKDIMV--------------SQRMSLSSCGSDWDIVRKCICAAYFHQAARLKGIGEYVN--VRTG 1081

  Fly   740 ESCADTDRNIYQTIS----GHDPCRTVY-------------FTNFKPAYMGEL----YT------ 777
            ..|     :::.|.|    |:.|...||             .|.....::.||    |:      
 Frog  1082 MPC-----HLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGK 1141

  Fly   778 ------RRIKE----LFQEVRIPPENMDVTFQE----------GSQKVFVTFKQDDWIEGSSKYV 822
                  ||.||    :.:|:.:..|.:....:|          .|.|::...::|....|:.:..
 Frog  1142 TRQENRRRAKEEVSAMEEEMMLAEEQLRARREEQEKKNILSSARSLKIYTPGRKDQVEPGTPRRT 1206

  Fly   823 P 823
            |
 Frog  1207 P 1207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 114..>697 CDD:441249 170/595 (29%)
DEXHc_TDRD9 115..295 CDD:350746 66/188 (35%)
TUDOR 892..1016 CDD:425754
dhx38XP_002937626.2 HrpA 517..>1175 CDD:441249 197/750 (26%)
Blue background indicates that the domain is not in the aligned region.

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