DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-E and Dhx35

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_001359442.1 Gene:Dhx35 / 71715 MGIID:1918965 Length:703 Species:Mus musculus


Alignment Length:685 Identity:177/685 - (25%)
Similarity:307/685 - (44%) Gaps:104/685 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 YKKFRFNLNRDKNLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKS-GKYCNI 165
            |........|.| |.::..|..||..:..:..|:|.|||||||:||:|||:.:..:.: |:.  :
Mouse    42 YAALSIEQQRQK-LPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRV--V 103

  Fly   166 VVTQPRRIAAISIANRVCQEREWQQNTVCSFQVG-LHRPNSLED---TRLLYCTTGVLLNNLINN 226
            .||||||:||:::|.||..||    ..|...:|| ..|.:...|   ||:.:.|.|:|:..::.:
Mouse   104 GVTQPRRVAAVTVAGRVADER----GAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVD 164

  Fly   227 KTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYFTTTNSIPP 291
            ..||.|:.|:|||.|||....|..:.:::::..... .:::|:.|||:||::..|:|....:..|
Mouse   165 PLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRG-DLRLIVASATLDAEKFRDFFNQNETSDP 228

  Fly   292 -----VITTNHRRKHSIEKFYRDQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIIDNMERKA 351
                 |..|...|...::.||.              ...||:..|    |.|..:|.|...|.. 
Mouse   229 ARDTSVTLTVEGRTFPVDIFYL--------------QSPVPDYIK----ATVDTVVKIHQTEGD- 274

  Fly   352 AIQSRQSYDEALRYGAVLIFLPGIYEIDT----MAENLTCMLENDPNIKVSIVRCFSLMTPENQR 412
                          |.:|.||.|..|::|    :.|....:........:.::..::.:....|.
Mouse   275 --------------GDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQM 325

  Fly   413 DVFNPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQR 477
            .||.......||:|:.||:||:|||:..:.||||....|::..:..::...|.:...|:|:..||
Mouse   326 KVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQR 390

  Fly   478 AGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILALALSPPN 542
            |||.||.|||:.||:..:..:. ::|:..:|||.|..|...:|:.|.|.:.:.:..  ..:|||.
Mouse   391 AGRGGRNRSGKCYRLYTEEAFD-QLPQSTVPEMQRSNLAPVILQLKALGIDNVLRF--HFMSPPP 452

  Fly   543 LSDIHNTILLLKEVGAL----YLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFNML 603
            ...:...:.||..:|.|    .||     :||       |..::..||:...:::::....|...
Mouse   453 AQSMVQALELLYALGGLDKDCRLT-----EPL-------GMRIAEFPLNPMFAKMLLESGNFGCS 505

  Fly   604 EEAIIIAAGLSTPGLFAHEGGRSQLGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNIVENGHDQES 668
            :|.:.|||.:....:|....  :|...:..:|..|:...|.        :||.||:.|.......
Mouse   506 QEVLSIAAMMQIQNVFVFPS--NQKSQATRVHRKFAVEEGD--------HLTMLNVYEAFIKHNK 560

  Fly   669 AIRWAKRFHVSLRSLKEIHLLVQELRVRCTHLGLIPFPVNPNQMMDDREKAIMLKVIIAGAFYPN 733
            :.:|.:...::.:.|.....:..:|:..     |:.|.|  .::..:.:...:|:.|::| |:.|
Mouse   561 SSQWCQEHFLNYKGLVRAATVRDQLKKL-----LVKFQV--PKVSSEGDPDPVLRCIVSG-FFAN 617

  Fly   734 YFTRSKESCADTDRNIYQTI-SGHD----PCRTVY 763
             ..|...|.|      |:|| ..|:    |...:|
Mouse   618 -AARFHSSGA------YRTIRDDHELHIHPASVLY 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 158/601 (26%)
TUDOR 892..1016 CDD:395449
Dhx35NP_001359442.1 HrpA 21..682 CDD:224557 177/685 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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