DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-E and Dqx1

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:XP_038964267.1 Gene:Dqx1 / 680434 RGDID:1591766 Length:780 Species:Rattus norvegicus


Alignment Length:678 Identity:160/678 - (23%)
Similarity:266/678 - (39%) Gaps:125/678 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 YYKKFRFNLNRDKNLSIYAKREEILAAINAHP--VVIIKGETGCGKTTQVPQ----YILDEAYKS 159
            ||:.    |.:.:.|.|:|.|...|..:.:.|  ||::.||.|.||:||:||    :.|...:::
  Rat    32 YYEL----LEQRRALPIWAARFLFLEHLESSPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQT 92

  Fly   160 GKYCNIVVTQPRRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLED-----TRLLYCTTGVL 219
            |:   :.||||..:||:|:|:||..|    .:.....::|...|.  ||     |.|.:|...:.
  Rat    93 GQ---VTVTQPYPLAAMSLASRVADE----MDLTLGHEIGYSIPQ--EDCTGPNTMLRFCWDRLF 148

  Fly   220 LNNLINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYFT 284
            |..:.:.:....::.:||||..||....|.|..::|.                           |
  Rat   149 LQEVASTRGPGAWSVLVLDEAQERSVASDLLQGLLRD---------------------------T 186

  Fly   285 TTNSIP----PVITTNHRRKHSIEKFYRDQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIID 345
            ...::|    .||.|:...:...:.|         |......|  ||...........|..|..|
  Rat   187 RLRNLPGDPRVVIVTDSALEPKFQAF---------WGNSPTVH--VPREPGENPTLTYKDTVPAD 240

  Fly   346 NMER--KAAIQSRQSYDEALRYGAVLIFLPGIYEIDTMAENLT---CMLENDPNIKVSIVRCFSL 405
            .:|.  :|.::..|. :||  .|.||::||...||....|:|:   .||.    :...:.|...|
  Rat   241 LVEAACQAVLELCQR-EEA--PGDVLVYLPSEEEISLCCESLSREMGMLA----VPGPLPRVLPL 298

  Fly   406 MTPENQ--RDVFNPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTW 468
            .....|  :.|:.......|||::|..:|:.|.::|.:.:|||..|....|.:......|..|..
  Rat   299 HPGCGQAIQTVYEDTDVSVRKIVVTHWLADFSFSLPFIQHVIDSGLELRSVYNPRIRAESQVLRR 363

  Fly   469 ASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEI 533
            .||.....|..|......|...|:.:|.....|.|....|::....|.:.||..|...:..|.|.
  Rat   364 ISKCQAEARLLRARGFPPGTCLRLYSKSTLDLEAPPLPHPKVCEENLSSLVLLLKRKQIAEPGEC 428

  Fly   534 LALALSPPNLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGY 598
            ..|....|..     .:..|:::..|....|      ||||:..|.|:|..||....::.::...
  Rat   429 HFLDRPAPEA-----LMQALEDLDYLAALDD------DGDLSDLGIILSEFPLPPELAKALLASC 482

  Fly   599 IFNMLEEAIIIAA------GLSTPGLFAHEGG-RSQLGDSFWMHYIFSDGSGSDLVAIWRVYLTY 656
            .||.::|.:.:||      |.:.|.|.|.|.. |..|.        .:||..|.|:.::..:   
  Rat   483 EFNCVDEMLTLAAMLTAAPGFTRPPLCAGEAALRRGLE--------HADGDHSSLIQVYEAF--- 536

  Fly   657 LNIVENGHDQESAIRWAKRFHVSLRSL---KEIHLLVQELRVRCTHLGLIPFPVNPNQMMDDREK 718
               |::|.|:    .|.:...:|..:|   :::...:.||..|      |..|::......::.:
  Rat   537 ---VQSGADE----TWCQARGLSWEALCQARKLRAELLELMQR------IELPLSLPAFGSEQNR 588

  Fly   719 AIMLKVIIAGAFYPNYFTRSKESCADTD 746
            ..:.|.:::|.|......|...|...:|
  Rat   589 RDLQKALLSGYFLKAMMRRGLMSKLPSD 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 148/615 (24%)
TUDOR 892..1016 CDD:395449
Dqx1XP_038964267.1 HrpA 15..>601 CDD:224557 156/661 (24%)
OB_NTP_bind 662..737 CDD:400182
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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