DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-E and bgcn

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster


Alignment Length:799 Identity:162/799 - (20%)
Similarity:290/799 - (36%) Gaps:226/799 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 EEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKSGKYCNIVVTQPRRIAAISIANRVCQER 186
            :|||.::.|..|::........|:..:|..|||:.  ..|..|:.:....|.|.::..|      
  Fly   155 DEILQSLYASRVIVYNAALCWDKSVFLPLVILDDC--RNKKSNVKIMCIERQAILATYN------ 211

  Fly   187 EWQQNTVCSF------QVGLHRP---NSLEDTRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHE 242
              .|.|...|      .||:..|   .....|.::|.|....|.:| .::...:.:|:|:::||.
  Fly   212 --SQRTANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLRSL-TSQQFRNISHLVVNDVHL 273

  Fly   243 RDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYF------------------------ 283
            .|...|.||..:|..|::: ::::::|:|...:.|:.:|:|                        
  Fly   274 HDPYTDILLSEIRMALSSH-QNLRVVLLSQMGNPKKFTDFFGEGLQLNMIKQPEVAPRVSYLNEL 337

  Fly   284 -------------TTTNSIPPVITTNHRRKHSIEKFYR--DQLG----------SIIWNEEDVGH 323
                         .....||.....|:.|...::|..:  .:||          ::.::...|.:
  Fly   338 HSCIALAGIHKGPDIYKEIPEAFRANNPRNEQMDKCLQAYGELGTDAALRPFLYAVNYDLAPVNY 402

  Fly   324 QQ----------VPEINK---------------------------------------------HG 333
            :.          ..|:||                                             ||
  Fly   403 RHSLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHECIDVLNSYSLHG 467

  Fly   334 Y--RAA----VKIIVIIDNMERKAAIQSRQSYDEALRY--GAVLIFLPGIYEIDTMAENLTCMLE 390
            |  ::|    |...:|||.|   ..::::..|... .|  |.:||.||..|.|    ..|..|:.
  Fly   468 YVVKSAKPDFVDYDLIIDIM---YLLRTKPEYSPG-EYSPGNILIILPTYYHI----VKLNYMIL 524

  Fly   391 NDPNIKVSIVRCFSLMTPENQRD-----VFNPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLA 450
            :. .:..|:..|...:..:|.|:     :.|...... |::|.|:|.||........|.||....
  Fly   525 SH-CLTGSLQECSIFLLYDNMRNDYLQALVNASDETV-KVVLATDIIESLCLKVPFKYQIDTACR 587

  Fly   451 KVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRV--YRMVNKHFYQREMPEFGIPEMLRL 513
            ...|.||.|.....|..|.:| :...|...:.:...|.|  :|:::|..|: |:.|...|.:..:
  Fly   588 LNNVYDTTSCSGDDRFEWVAK-DALLRRELILQPNKGDVQCFRLISKEAYE-ELSETSQPSLQTM 650

  Fly   514 PLQNSVLKAKVLNMGSPV-EILALALSPPNLSDIHNTILLLKEVGALYLTVDGIYDPLDG--DLT 575
            .|....|..|:|:..:.: |.|.:.:|||.|.::|:.:..||::           |.||.  |:|
  Fly   651 QLDKICLAVKLLSPNTIISEYLGITISPPPLINVHHAVQFLKKI-----------DVLDDAEDVT 704

  Fly   576 YWGTIMSRLPLDTRQSRLIILGYIFNMLEEAIIIAAGLSTPGLFAHEGGRSQLG-------DSFW 633
            :.|..:..:|:..:..|::|.|.:...|:..:.|.:.|||         ...||       |:.|
  Fly   705 WLGCRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLST---------ADPLGIPFTEDIDNLW 760

  Fly   634 MHY-------------IFSDGSGSDLVAIWRVYLTYLNIVEN-------GHDQESAIRWAKRFHV 678
            ..:             ..||...||.....|:|..:.|.:.|       ..:.|..:........
  Fly   761 DRFTIYIQNSIKKERTYLSDNQFSDHFIFVRLYKEWQNRMHNRTPPLYLKDEYEFMLNGLMEQLT 825

  Fly   679 SLR-----SLKEIHLLVQELRVRCTHLGLIPFPVNPNQMMDDREKAIMLKVIIAGAFYPNYFTRS 738
            |:|     ||:..:|:....::...:|         |||..:..   |:|..:.|..|||.:   
  Fly   826 SIRSEIVSSLRAANLIHSRGKLSMNNL---------NQMSCNWH---MVKAALTGGMYPNIY--- 875

  Fly   739 KESCADTDR-NIYQTISGH 756
               ..||.: ::....||:
  Fly   876 ---AVDTRKSSLKSAFSGN 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 148/737 (20%)
TUDOR 892..1016 CDD:395449
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 3/31 (10%)
ANK 407..>460 CDD:238125 3/52 (6%)
Ank_2 413..>460 CDD:289560 3/46 (7%)
HrpA <484..973 CDD:224557 104/458 (23%)
HA2 694..763 CDD:214852 19/88 (22%)
OB_NTP_bind 823..945 CDD:285018 19/87 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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