DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-E and zcchc17

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_956838.2 Gene:zcchc17 / 393516 ZFINID:ZDB-GENE-040325-2 Length:235 Species:Danio rerio


Alignment Length:54 Identity:17/54 - (31%)
Similarity:22/54 - (40%) Gaps:17/54 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   821 YVPVSG-RVQSEVYKAVMMRQNRVERPIHIMNPSAFMSYVQQRGIGDVIEGRWI 873
            :|.:.| |.|..|:|: .|...|||.|..|:               ||.|..||
Zfish    35 FVKIPGYRKQGLVHKS-EMSACRVENPAEIV---------------DVGEQVWI 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557
TUDOR 892..1016 CDD:395449
zcchc17NP_956838.2 S1_pNO40 16..89 CDD:240191 17/54 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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