DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-E and pea

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster


Alignment Length:723 Identity:199/723 - (27%)
Similarity:322/723 - (44%) Gaps:141/723 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 KKFRFNLNRD-------KNLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKS- 159
            ||..|....|       ::|.||..|::::.|:..:.::|:.||||.|||||:.||:.:..:.: 
  Fly   567 KKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTAR 631

  Fly   160 GKYCNIVVTQPRRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLI 224
            ||   |..|||||:||:|:|.||.:|...:......:.:......|.| |.:.|.|.|:||...:
  Fly   632 GK---IGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPE-TIIKYMTDGMLLRECL 692

  Fly   225 NNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSR-HVKIILMSATIDAKELSDYFTTTNS 288
            ....|..|:.|:|||.|||..:.|.|..:::  .|...| .:|:|:.|||:||.:.|.||...  
  Fly   693 MEAELKSYSVIMLDEAHERTIHTDVLFGLLK--TAVQKRPELKLIVTSATLDAVKFSQYFFKA-- 753

  Fly   289 IPPVITTNHRRKHSIEKFYRDQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIIDNMERKAAI 353
              |:.|. ..|...:|..|..:                ||.:   |..|..|.|:..::....  
  Fly   754 --PIFTI-PGRTFPVEVLYTKE----------------PETD---YLDASLITVMQIHLREPP-- 794

  Fly   354 QSRQSYDEALRYGAVLIFLPGIYEIDTMAENLTCMLEN-DPNI-KVSIVRCFSLMTPENQRDVFN 416
                        |.:|:||.|..||||..|.|...::: .|:: ::.|:..:|.:..|.|..:|:
  Fly   795 ------------GDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFD 847

  Fly   417 PPPPGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRV 481
            |.|.|.||:::.|||||:|:|:..:.||:|....|.||.::.:...||.:|..|:|..:|||||.
  Fly   848 PAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRA 912

  Fly   482 GRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGS----------PVEILAL 536
            ||...|:.||:..:..|:.||....:||:.|..|..:||:.|.:.:..          |||.|.:
  Fly   913 GRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVM 977

  Fly   537 ALSPPNLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFN 601
            |     |..:|:...|..|                |.||..|..|:..||:...|:::|:.....
  Fly   978 A-----LEQLHSLSALDDE----------------GLLTRLGRRMAEFPLEPNLSKMLIMSVALQ 1021

  Fly   602 MLEEAIIIAAGLSTPGLFAHEGGRSQLGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNIVENGHDQ 666
            ..:|.:.|.:.||...:|.....:..|.|.....:..::|.          :||.|.:..:..:.
  Fly  1022 CSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGD----------HLTLLAVYNSWKNN 1076

  Fly   667 ESAIRWAKRFHVSLRSLKEIHLLVQELRVRCTHLGLIPFPVNPNQMMDDREKAIMLKVIIAGAFY 731
            :.:..|.....|.:|:||.    .|::|.:.  ||::           ||.|   |.|:.||   
  Fly  1077 KFSNAWCYENFVQIRTLKR----SQDVRKQL--LGIM-----------DRHK---LDVVSAG--- 1118

  Fly   732 PNYFTRSKESCADTDRNI--------YQTISGHDPCRTVY------FTNFKPAYMGELY---TRR 779
            .|.....|..|:...||.        |:|:.   ..:.||      ..|.:|.::  :|   .:.
  Fly  1119 KNSVRIQKAICSGFFRNAAKKDPQEGYRTLV---DSQVVYIHPSSALFNRQPEWV--IYHELVQT 1178

  Fly   780 IKELFQEV 787
            .||..:||
  Fly  1179 TKEYMREV 1186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 170/597 (28%)
TUDOR 892..1016 CDD:395449
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189
HrpA 573..1221 CDD:224557 196/717 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468040
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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