DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-E and Dhx15

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_001260766.1 Gene:Dhx15 / 35654 FlyBaseID:FBgn0033160 Length:729 Species:Drosophila melanogaster


Alignment Length:753 Identity:203/753 - (26%)
Similarity:331/753 - (43%) Gaps:141/753 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 LLNGTLLNEQPQGKRIRTLDDLDTDDEGEETEIRRDDEYYKKFRFNLNRDKNLSIYAKREEILAA 127
            :|.|.:.|:||.     |::.|......:    |..:.|.|:..        |.::..:.:.:..
  Fly    37 ILGGFVPNKQPP-----TMNPLTNTPYSQ----RYQNLYKKRIA--------LPVFEYQADFMRL 84

  Fly   128 INAHPVVIIKGETGCGKTTQVPQYILDEAYKSGKYCNIVVTQPRRIAAISIANRVCQEREWQQNT 192
            ::.|..:::.||||.|||||:||:.:|.|...|:. .:..|||||:||:|:|.||.:|.:.:...
  Fly    85 LSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRK-GVSCTQPRRVAAMSVAQRVSEEMDVKLGE 148

  Fly   193 VCSFQVGLHRPNSLED-----TRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHERDQNMDFLLI 252
            ...:.:      ..||     |.|.|.|.|:||...:::..|..|..|:|||.|||....|.|:.
  Fly   149 EVGYSI------RFEDCSTAKTLLKYMTDGMLLREAMSDPMLDQYQVILLDEAHERTLATDILMG 207

  Fly   253 VVRRLLATNSRHVKIILMSATIDAKELSDYFTTTNSIPPVITTNHRRKHSIEKFYRDQLGSIIWN 317
            |::.::...| .:|:::||||:||.:...||...    |::.. ..|.|.:|.||          
  Fly   208 VLKEVIRQRS-DLKLVVMSATLDAGKFQQYFDNA----PLMKV-PGRTHPVEIFY---------- 256

  Fly   318 EEDVGHQQVPEINKHGYRAAVKIIVIIDNMERKAAIQSRQSYDEALRYGAVLIFLPGIYEIDTMA 382
                    .||..:....||::.::.|...|.   |:           |.:|:||.|..||:...
  Fly   257 --------TPEPERDYLEAAIRTVIQIHMCEE---IE-----------GDILMFLTGQEEIEEAC 299

  Fly   383 ENLTCMLENDPNIKVSIVRC---FSLMTPENQRDVFNP-PPPGF-----RKIILTTNIAESSITV 438
            :.:...::| ...::..::|   :|.:.|..|:.:|.| |||..     ||::::|||||:|:|:
  Fly   300 KRIKREIDN-LGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTI 363

  Fly   439 PDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMP 503
            ..|.:|||...||.||.:......||.::..|||:.:||:||.||.|.|:.:|:..:..::.||.
  Fly   364 DGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFKNEMQ 428

  Fly   504 EFGIPEMLRLPLQNSVLKAKVLNMGSPVEILALALSPPNLSDIHNTILLLKEVGALYLTVDGIYD 568
            :...||:||..|...||:.|.|.:...|..  ..:.||....:...:.||..:.||        |
  Fly   429 DNTYPEILRSNLGTVVLQLKKLGIDDLVHF--DFMDPPAPETLMRALELLNYLAAL--------D 483

  Fly   569 PLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFNMLEEAIIIAAGLSTPGLFAHEGGRSQLGDSFW 633
            . ||:||..|.:||..|||.:.::::|.....|...|.:.|.|.||.|..|.......:..|...
  Fly   484 D-DGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAKKAADEAK 547

  Fly   634 MHYIFSDGSGSDLVAIWRVYLTYLNIVENGHDQESAIRWAKRFHVSLRSLKEIHLLVQE------ 692
            |.:...||.          :||.||:............|.....::.||||....:.|:      
  Fly   548 MRFAHIDGD----------HLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQLARIMD 602

  Fly   693 ---LRVRCTHLGLIPFPVNPNQMMDDREKAIMLKVIIAGAFY-------PNYFTRSKE------- 740
               ||...|......:.||            :.|.::.|.|.       ..|:...|:       
  Fly   603 RFNLRRTSTEFTSKDYYVN------------IRKALVQGFFMQVAHLERTGYYLTIKDNQNVQLH 655

  Fly   741 --SCAD--TDRNIYQ--TISGHDPCRTVYFTNFKPAYM 772
              :|.|  .|..||.  .::..:..|||  |:.||.::
  Fly   656 PSTCLDHKPDWVIYNEFVLTTKNYIRTV--TDVKPEWL 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 174/606 (29%)
TUDOR 892..1016 CDD:395449
Dhx15NP_001260766.1 Motor_domain 50..>102 CDD:277568 11/63 (17%)
DEXDc 67..255 CDD:214692 64/208 (31%)
DEXDc 91..228 CDD:238005 52/144 (36%)
HELICc 315..408 CDD:197757 35/92 (38%)
HA2 478..561 CDD:214852 28/101 (28%)
OB_NTP_bind 595..698 CDD:285018 22/111 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468038
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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