DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spn-E and Y108F1.5

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_001361911.1 Gene:Y108F1.5 / 353490 WormBaseID:WBGene00022433 Length:147 Species:Caenorhabditis elegans


Alignment Length:140 Identity:31/140 - (22%)
Similarity:52/140 - (37%) Gaps:26/140 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   548 NTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFNMLEEAIIIAAG 612
            |.:.||..:||:..| ..:..||       |..|:..||....|:.::....|....|.:.|.|.
 Worm     3 NGLELLYALGAIDET-SQLTSPL-------GLQMAEFPLPPMHSKCLLKSAEFGCFTEMVTIVAM 59

  Fly   613 LSTPGLFAHEGGRSQLGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNI----VENGHDQESAIRWA 673
            :....:|.....:....|.....:...:|:          ::|.||:    ||||..:    :|.
 Worm    60 MQIQDVFITPYRQRHQADVIRKKFAVEEGN----------HITMLNVFTKFVENGRSK----KWC 110

  Fly   674 KRFHVSLRSL 683
            ....|:.|.|
 Worm   111 SDHFVNYRGL 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 31/140 (22%)
TUDOR 892..1016 CDD:395449
Y108F1.5NP_001361911.1 HrpA <1..>144 CDD:224557 31/140 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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