DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-E and Rhau

DIOPT Version :10

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_610056.1 Gene:Rhau / 35339 FlyBaseID:FBgn0032883 Length:942 Species:Drosophila melanogaster


Alignment Length:857 Identity:237/857 - (27%)
Similarity:368/857 - (42%) Gaps:191/857 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 AAPQGYISSDPRLMATKFKSSEVPNRELIGTDYV-SKIVAKEKCLLNGTLLNEQPQGKRIRTLDD 83
            :||.|.:.....||.   ..|..|:|:.:....| :|...:.:.||:........:.|....  |
  Fly    59 SAPSGVLERVKELME---DYSRAPSRQNVDDKNVDAKFQQQFRHLLSVNFEEFVAETKERNA--D 118

  Fly    84 LD----TDDEGEETEI--RRDDEYYKKFRFNLNRDKNLSIYAKREEILAAINAHPVVIIKGETGC 142
            ||    ..||..:.|:  |:.:|..||   .|...|.|......::|:.|:..:.|::|.|.|||
  Fly   119 LDWVNPKLDERLQLELGQRQLEENAKK---RLEARKKLPTMKYADDIIQAVRENQVILIVGSTGC 180

  Fly   143 GKTTQVPQYILDEAYKSG--KYCNIVVTQPRRIAAISIANRVCQER-EWQQNTVCSFQVGLHRPN 204
            ||||||||.:||:|...|  ..|.|:.||||||:||:||..|..|| |...|:| .:|:.|....
  Fly   181 GKTTQVPQILLDDAISRGCASSCRIICTQPRRISAIAIAEWVSYERCESLGNSV-GYQIRLESRK 244

  Fly   205 SLEDTRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIIL 269
            :.|...:.||||||||..|.::..:.:.:.::|||:|||....| ||:.:.:::..:...:|:||
  Fly   245 ARERASITYCTTGVLLQQLQSDPLMHNLSVLILDEIHERSVETD-LLMGLLKVILPHRPDLKVIL 308

  Fly   270 MSATIDAKELSDYFTTTNSIP---------PV---------ITTNHRRKHSIEKFYRDQLGSIIW 316
            ||||:..::..|||   |:.|         ||         ..||    :..:|| ||:...   
  Fly   309 MSATVREQDFCDYF---NNCPMFRIEGVMFPVKMLYLEDVLSKTN----YEFQKF-RDRRPK--- 362

  Fly   317 NEEDVGHQQVPEINKHGYRAAVKIIVIIDNMERKAAIQS-----RQSYD----EALRY------- 365
                   :..||                ..|:.:|.|:.     |.|||    :.||.       
  Fly   363 -------RDPPE----------------RRMKHEAMIEPYLRRIRNSYDSRVLDKLRLPESEGCE 404

  Fly   366 ------------------GAVLIFLPGIYEIDTMAENLTCMLENDPNIK-------VSIVRCFSL 405
                              ||:|:||||..:|    ..|..:|:.....|       :::....||
  Fly   405 DIDFIADLVYYICENEPEGAILVFLPGYDKI----SQLYNILDKPKTSKGQRWRDHMAVFPLHSL 465

  Fly   406 MTPENQRDVFNPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWAS 470
            |....|:.||..||.|.||:|::|.|||:|:|:.||.|||:....|....|..::..||...|.:
  Fly   466 MQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVT 530

  Fly   471 KANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILA 535
            |||.:||.||.||:|.|..|.:.::....| |.:...||:||..|::.:|..|:|::..|...|.
  Fly   531 KANTQQRRGRAGRVRPGICYNLFSRAREDR-MDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQ 594

  Fly   536 LALSPPNLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIF 600
            ..::.||...|...:.|||.:.||..|         |.||..|..:::||:|.:..::|::..:|
  Fly   595 TLINAPNPEAIKMGVELLKRIEALDQT---------GTLTPLGMHLAKLPIDPQMGKMILMSALF 650

  Fly   601 NMLEEAIIIAAGLSTPGLFAHEGG-------------RSQLGDSFWMH-----YIFSDGSGSDLV 647
            ..|:.....||.||....|....|             |:...|...:|     |..|..|.::..
  Fly   651 CCLDPITSAAAALSFKSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAERD 715

  Fly   648 AIWRVYLTYLNI--VENGHDQESAIRWAKRFHVSLRSLKEIHLLVQELRVRCTHLGLIPFPVNPN 710
            ..::.:|:.:.:  :|...:|.|.:.:..:|..| .:.|:.                   ..|.|
  Fly   716 FCYKNFLSSMTLQQLERMKNQFSELLYNYKFLAS-SNCKDA-------------------ASNKN 760

  Fly   711 QMMDDREKAIMLKVIIAGAFYPN--YFTRSKE----------SCADTDR-------NIYQTISGH 756
            .     ||..:|:.||....|||  :..:|::          ...|..|       ::....||.
  Fly   761 S-----EKIPLLRAIIGAGLYPNMAHLRKSRQIKNRVRAIHTMATDDGRRVNFHPSSVNSGESGF 820

  Fly   757 DPCRTVYFTNFK 768
            |....|||...|
  Fly   821 DSAYFVYFQRQK 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 114..>697 CDD:441249 192/664 (29%)
DEXHc_TDRD9 115..295 CDD:350746 74/200 (37%)
TUDOR 892..1016 CDD:425754
RhauNP_610056.1 HrpA 160..>664 CDD:441249 174/553 (31%)
OB_NTP_bind 767..856 CDD:400182 16/66 (24%)
Blue background indicates that the domain is not in the aligned region.

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