DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-E and Rhau

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_001260639.1 Gene:Rhau / 35339 FlyBaseID:FBgn0032883 Length:942 Species:Drosophila melanogaster


Alignment Length:857 Identity:237/857 - (27%)
Similarity:368/857 - (42%) Gaps:191/857 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 AAPQGYISSDPRLMATKFKSSEVPNRELIGTDYV-SKIVAKEKCLLNGTLLNEQPQGKRIRTLDD 83
            :||.|.:.....||.   ..|..|:|:.:....| :|...:.:.||:........:.|....  |
  Fly    59 SAPSGVLERVKELME---DYSRAPSRQNVDDKNVDAKFQQQFRHLLSVNFEEFVAETKERNA--D 118

  Fly    84 LD----TDDEGEETEI--RRDDEYYKKFRFNLNRDKNLSIYAKREEILAAINAHPVVIIKGETGC 142
            ||    ..||..:.|:  |:.:|..||   .|...|.|......::|:.|:..:.|::|.|.|||
  Fly   119 LDWVNPKLDERLQLELGQRQLEENAKK---RLEARKKLPTMKYADDIIQAVRENQVILIVGSTGC 180

  Fly   143 GKTTQVPQYILDEAYKSG--KYCNIVVTQPRRIAAISIANRVCQER-EWQQNTVCSFQVGLHRPN 204
            ||||||||.:||:|...|  ..|.|:.||||||:||:||..|..|| |...|:| .:|:.|....
  Fly   181 GKTTQVPQILLDDAISRGCASSCRIICTQPRRISAIAIAEWVSYERCESLGNSV-GYQIRLESRK 244

  Fly   205 SLEDTRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIIL 269
            :.|...:.||||||||..|.::..:.:.:.::|||:|||....| ||:.:.:::..:...:|:||
  Fly   245 ARERASITYCTTGVLLQQLQSDPLMHNLSVLILDEIHERSVETD-LLMGLLKVILPHRPDLKVIL 308

  Fly   270 MSATIDAKELSDYFTTTNSIP---------PV---------ITTNHRRKHSIEKFYRDQLGSIIW 316
            ||||:..::..|||   |:.|         ||         ..||    :..:|| ||:...   
  Fly   309 MSATVREQDFCDYF---NNCPMFRIEGVMFPVKMLYLEDVLSKTN----YEFQKF-RDRRPK--- 362

  Fly   317 NEEDVGHQQVPEINKHGYRAAVKIIVIIDNMERKAAIQS-----RQSYD----EALRY------- 365
                   :..||                ..|:.:|.|:.     |.|||    :.||.       
  Fly   363 -------RDPPE----------------RRMKHEAMIEPYLRRIRNSYDSRVLDKLRLPESEGCE 404

  Fly   366 ------------------GAVLIFLPGIYEIDTMAENLTCMLENDPNIK-------VSIVRCFSL 405
                              ||:|:||||..:|    ..|..:|:.....|       :::....||
  Fly   405 DIDFIADLVYYICENEPEGAILVFLPGYDKI----SQLYNILDKPKTSKGQRWRDHMAVFPLHSL 465

  Fly   406 MTPENQRDVFNPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWAS 470
            |....|:.||..||.|.||:|::|.|||:|:|:.||.|||:....|....|..::..||...|.:
  Fly   466 MQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVT 530

  Fly   471 KANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILA 535
            |||.:||.||.||:|.|..|.:.::....| |.:...||:||..|::.:|..|:|::..|...|.
  Fly   531 KANTQQRRGRAGRVRPGICYNLFSRAREDR-MDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQ 594

  Fly   536 LALSPPNLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIF 600
            ..::.||...|...:.|||.:.||..|         |.||..|..:::||:|.:..::|::..:|
  Fly   595 TLINAPNPEAIKMGVELLKRIEALDQT---------GTLTPLGMHLAKLPIDPQMGKMILMSALF 650

  Fly   601 NMLEEAIIIAAGLSTPGLFAHEGG-------------RSQLGDSFWMH-----YIFSDGSGSDLV 647
            ..|:.....||.||....|....|             |:...|...:|     |..|..|.::..
  Fly   651 CCLDPITSAAAALSFKSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAERD 715

  Fly   648 AIWRVYLTYLNI--VENGHDQESAIRWAKRFHVSLRSLKEIHLLVQELRVRCTHLGLIPFPVNPN 710
            ..::.:|:.:.:  :|...:|.|.:.:..:|..| .:.|:.                   ..|.|
  Fly   716 FCYKNFLSSMTLQQLERMKNQFSELLYNYKFLAS-SNCKDA-------------------ASNKN 760

  Fly   711 QMMDDREKAIMLKVIIAGAFYPN--YFTRSKE----------SCADTDR-------NIYQTISGH 756
            .     ||..:|:.||....|||  :..:|::          ...|..|       ::....||.
  Fly   761 S-----EKIPLLRAIIGAGLYPNMAHLRKSRQIKNRVRAIHTMATDDGRRVNFHPSSVNSGESGF 820

  Fly   757 DPCRTVYFTNFK 768
            |....|||...|
  Fly   821 DSAYFVYFQRQK 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 193/665 (29%)
TUDOR 892..1016 CDD:395449
RhauNP_001260639.1 DEXDc 147..328 CDD:214692 74/185 (40%)
DEXDc 170..312 CDD:238005 62/143 (43%)
Helicase_C 411..544 CDD:278689 47/136 (35%)
HA2 614..696 CDD:214852 21/90 (23%)
OB_NTP_bind 735..853 CDD:285018 25/123 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468043
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D278674at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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