DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-E and l(2)37Cb

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster


Alignment Length:670 Identity:187/670 - (27%)
Similarity:307/670 - (45%) Gaps:98/670 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 DDLD-----TDDEGEETEIRRDDEYYKKFRFNLNRD---KNLSIYAKREEILAAINAHPVVIIKG 138
            |.:|     |.|...|....|..|..:|.|..|..|   ::|.:|..:|:::||:..|.|:||:|
  Fly   211 DQIDFIQALTLDGSREKSSSRQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEG 275

  Fly   139 ETGCGKTTQVPQYILDEAYKSGKYCNIVVTQPRRIAAISIANRVCQEREWQQNTVCSFQVGLHRP 203
            |||.|||||||||:::..:...|.. |..|||||:||:|:|.||.:|...:......:.:.....
  Fly   276 ETGSGKTTQVPQYLVEAGFTKDKKM-IGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDC 339

  Fly   204 NSLEDTRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKII 268
            .| :.|.|.|.|.|.|....::...|..|:.:::||.|||..:.|.|..:|:. :|.....:|::
  Fly   340 TS-DRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKD-IARFRPELKLL 402

  Fly   269 LMSATIDAKELSDYFTTTNSIPPVITTNHRRKHSIEKFYRDQLGSIIWNEEDVGHQQVPEINKHG 333
            :.|||:||::.|.:|...    |:.....|| :.::.||                .:.||.:   
  Fly   403 ISSATLDAEKFSAFFDDA----PIFRIPGRR-YPVDIFY----------------TKAPEAD--- 443

  Fly   334 YRAAVKIIVIIDNMERKAAIQSRQSYDEALRYGAVLIFLPGIYEIDTMAENLTCMLEN-DPNIK- 396
            |..|..:.|:        .|.:.|.      .|.:|:||.|..||:|..|.|...::. ...|: 
  Fly   444 YIDACCVSVL--------QIHATQP------LGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRE 494

  Fly   397 VSIVRCFSLMTPENQRDVFNPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSF 461
            :.::..::.:..:.|..:|.|.||..||:||.|||||:|:|:.::.||||...||....::.:..
  Fly   495 LIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGM 559

  Fly   462 SSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLN 526
            .||.:...|||:..|||||.||...|:.:|:.....|:.|:.:..:||:.|:.|.|:||..|.|.
  Fly   560 ESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALG 624

  Fly   527 MGSPVEILALALSPPNLSDIHNTILLLKE----VGALYLTVDGIYDPLDGDLTYWGTIMSRLPLD 587
            :...:..  ..|.||.    |.|::|..|    :|||         ...|:||..|..|:..|:|
  Fly   625 INDLIHF--DFLDPPP----HETLVLALEQLYALGAL---------NHHGELTKLGRRMAEFPVD 674

  Fly   588 TRQSRLIILGYIFNMLEEAIIIAAGLS-TPGLFAHEGGRSQLGDSFWMHYIFSDGSGSDLVAIWR 651
            ....::::....:...||.:.|||.|| ...:|.....:....|:...::....|.         
  Fly   675 PMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNFNHMHGD--------- 730

  Fly   652 VYLTYLNIVENGHDQESAIRWAKRFHVSLRSLKEIHLLVQEL-----RVRCTHLGLIPFPVNPNQ 711
             :|:.|.:.....:.:.:.:|.....:..||:|....:.::|     ||....:..:|..||   
  Fly   731 -HLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMVSCLPETVN--- 791

  Fly   712 MMDDREKAIMLKVIIAGAFY 731
                     :.|...||.||
  Fly   792 ---------VRKAATAGYFY 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 168/595 (28%)
TUDOR 892..1016 CDD:395449
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 184/659 (28%)
DEXDc 269..408 CDD:238005 51/141 (36%)
HELICc 491..581 CDD:197757 33/89 (37%)
HA2 651..735 CDD:214852 21/102 (21%)
OB_NTP_bind 770..869 CDD:285018 11/45 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468048
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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