DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spn-E and dhx15

DIOPT Version :10

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_001108613.1 Gene:dhx15 / 321931 ZFINID:ZDB-GENE-030131-650 Length:769 Species:Danio rerio


Alignment Length:750 Identity:207/750 - (27%)
Similarity:331/750 - (44%) Gaps:144/750 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 TEIRRDDEYYKKFRFNLNRDKNLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILD--- 154
            |.:.....||:..:..|    .|.::..:|.....:|.|...::.||||.|||||:||:.:|   
Zfish    93 TNLPHTPRYYEILKKRL----QLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVR 153

  Fly   155 --EAYKSGKYCNIVVTQPRRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTG 217
              ...|.|..|    |||||:||:|:|.||..|.:........:.:.....:|.: |.|.|.|.|
Zfish   154 SLPGPKRGVAC----TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDG 213

  Fly   218 VLLNNLINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDY 282
            :||...:|:..|..|..|:|||.|||....|.|:.|::.::...| .:|:|:||||:||.:...|
Zfish   214 MLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS-DLKVIVMSATLDAGKFQVY 277

  Fly   283 FTTTNSIPPVITTNHRRKHSIEKFYRDQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIIDNM 347
            |...    |::|. ..|.|.:|.||                  .||..:....||::.::.|...
Zfish   278 FDNC----PLLTI-PGRTHPVEIFY------------------TPEPERDYLEAAIRTVIQIHMC 319

  Fly   348 ERKAAIQSRQSYDEALRYGAVLIFLPGIYEIDTMAENLTCMLEN-DPNI-KVSIVRCFSLMTPEN 410
            |.          ||    |.||:||.|..|||...:.:...::: .|:: .:.|:..:|.:.|:.
Zfish   320 EE----------DE----GDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQ 370

  Fly   411 QRDVFNPPPP-------GFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTW 468
            |:.:|.||||       | ||::::|||||:|:|:..|.:|||...||.||.:......||.:|.
Zfish   371 QQRIFEPPPPRKPNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTA 434

  Fly   469 ASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEI 533
            .|||:.:|||||.||.|.|:.:|:..:..|:.||.:...||:||..|.:.||:.|.|.:...|..
Zfish   435 ISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF 499

  Fly   534 LALALSPPNLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGY 598
              ..:.||....:...:.||..:.||       .|  |||||..|::|:..|||.:.::::|...
Zfish   500 --DFMDPPAPETLMRALELLNYLAAL-------ND--DGDLTELGSMMAEFPLDPQLAKMVIASC 553

  Fly   599 IFNMLEEAIIIAAGLSTPGLFAHEGGRSQLGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNIVENG 663
            .||...|.:.|.|.||.|..|.......:..|...|.:...||.          :||.||:....
Zfish   554 DFNCSNEVLSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGD----------HLTLLNVYHAF 608

  Fly   664 HDQESAIRWAKRFHVSLRSLKEIHLLVQELRVRCTHLGLIPFPVNPNQMMD------------DR 716
            .....:::|.....::.|||.....:.|:|                :::||            .|
Zfish   609 KQNHESVQWCYDNFINYRSLMSADNVRQQL----------------SRIMDRFNLPRRSTEFTSR 657

  Fly   717 EKAIMLKVIIAGAFYPN--YFTRSKESCADTDRNIYQ----TISGHDPCRTVY------------ 763
            :..|.::..:...|:..  :..|:.......|..:.|    |:..|.|...:|            
Zfish   658 DYYINIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIR 722

  Fly   764 -FTNFKPAYMGELYTRRIKELFQEVRIPPENMDVT 797
             .|:.||.::              |:|.|:..:::
Zfish   723 TCTDIKPEWL--------------VKIAPQYYEMS 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 114..>697 CDD:441249 185/596 (31%)
DEXHc_TDRD9 115..295 CDD:350746 64/184 (35%)
TUDOR 892..1016 CDD:425754
dhx15NP_001108613.1 HrpA 110..>737 CDD:441249 202/721 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.