DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spn-E and dhx15

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_001108613.1 Gene:dhx15 / 321931 ZFINID:ZDB-GENE-030131-650 Length:769 Species:Danio rerio


Alignment Length:750 Identity:207/750 - (27%)
Similarity:331/750 - (44%) Gaps:144/750 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 TEIRRDDEYYKKFRFNLNRDKNLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILD--- 154
            |.:.....||:..:..|    .|.::..:|.....:|.|...::.||||.|||||:||:.:|   
Zfish    93 TNLPHTPRYYEILKKRL----QLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVR 153

  Fly   155 --EAYKSGKYCNIVVTQPRRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTG 217
              ...|.|..|    |||||:||:|:|.||..|.:........:.:.....:|.: |.|.|.|.|
Zfish   154 SLPGPKRGVAC----TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDG 213

  Fly   218 VLLNNLINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDY 282
            :||...:|:..|..|..|:|||.|||....|.|:.|::.::...| .:|:|:||||:||.:...|
Zfish   214 MLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS-DLKVIVMSATLDAGKFQVY 277

  Fly   283 FTTTNSIPPVITTNHRRKHSIEKFYRDQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIIDNM 347
            |...    |::|. ..|.|.:|.||                  .||..:....||::.::.|...
Zfish   278 FDNC----PLLTI-PGRTHPVEIFY------------------TPEPERDYLEAAIRTVIQIHMC 319

  Fly   348 ERKAAIQSRQSYDEALRYGAVLIFLPGIYEIDTMAENLTCMLEN-DPNI-KVSIVRCFSLMTPEN 410
            |.          ||    |.||:||.|..|||...:.:...::: .|:: .:.|:..:|.:.|:.
Zfish   320 EE----------DE----GDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQ 370

  Fly   411 QRDVFNPPPP-------GFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTW 468
            |:.:|.||||       | ||::::|||||:|:|:..|.:|||...||.||.:......||.:|.
Zfish   371 QQRIFEPPPPRKPNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTA 434

  Fly   469 ASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEI 533
            .|||:.:|||||.||.|.|:.:|:..:..|:.||.:...||:||..|.:.||:.|.|.:...|..
Zfish   435 ISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF 499

  Fly   534 LALALSPPNLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGY 598
              ..:.||....:...:.||..:.||       .|  |||||..|::|:..|||.:.::::|...
Zfish   500 --DFMDPPAPETLMRALELLNYLAAL-------ND--DGDLTELGSMMAEFPLDPQLAKMVIASC 553

  Fly   599 IFNMLEEAIIIAAGLSTPGLFAHEGGRSQLGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNIVENG 663
            .||...|.:.|.|.||.|..|.......:..|...|.:...||.          :||.||:....
Zfish   554 DFNCSNEVLSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGD----------HLTLLNVYHAF 608

  Fly   664 HDQESAIRWAKRFHVSLRSLKEIHLLVQELRVRCTHLGLIPFPVNPNQMMD------------DR 716
            .....:::|.....::.|||.....:.|:|                :::||            .|
Zfish   609 KQNHESVQWCYDNFINYRSLMSADNVRQQL----------------SRIMDRFNLPRRSTEFTSR 657

  Fly   717 EKAIMLKVIIAGAFYPN--YFTRSKESCADTDRNIYQ----TISGHDPCRTVY------------ 763
            :..|.::..:...|:..  :..|:.......|..:.|    |:..|.|...:|            
Zfish   658 DYYINIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIR 722

  Fly   764 -FTNFKPAYMGELYTRRIKELFQEVRIPPENMDVT 797
             .|:.||.::              |:|.|:..:::
Zfish   723 TCTDIKPEWL--------------VKIAPQYYEMS 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 185/597 (31%)
TUDOR 892..1016 CDD:395449
dhx15NP_001108613.1 DEXDc 105..296 CDD:214692 69/205 (34%)
DEXDc 128..269 CDD:238005 54/146 (37%)
HELICc 356..449 CDD:197757 38/93 (41%)
HA2 519..602 CDD:214852 29/101 (29%)
OB_NTP_bind 636..739 CDD:285018 20/132 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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