DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-E and SPBC15C4.05

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_595925.1 Gene:SPBC15C4.05 / 2539831 PomBaseID:SPBC15C4.05 Length:1428 Species:Schizosaccharomyces pombe


Alignment Length:927 Identity:253/927 - (27%)
Similarity:408/927 - (44%) Gaps:226/927 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EVMDFFDFSKELKRVAAAPQGYISSDPRLMAT-----KFKSSEVPNRELIGTDYVSKIVAKEKCL 63
            |.:|....||||:...:|      :..:|||.     ||...|.|..                  
pombe   566 EKLDSIIKSKELETPTSA------TTSKLMAPMDNIGKFSGFERPPE------------------ 606

  Fly    64 LNGTLLNEQPQGKRIRTLDDLDTDDEGEETEIRRDDEYYKKFRFNLNRDKNLSIYAKREEILAAI 128
               ||||:..|        .|:::..          |.:|.||      ..|.....||.|:.|:
pombe   607 ---TLLNKWRQ--------QLESESA----------EKFKVFR------NQLPATMFRETIIDAV 644

  Fly   129 NAHPVVIIKGETGCGKTTQVPQYILDEAYKSGKYCNIVVTQPRRIAAISIANRVCQEREWQQNTV 193
            |...::||.|:|||||:||:|.::|:.:.|:||...|.||:||||:|||:||||.||        
pombe   645 NNSQLLIISGDTGCGKSTQIPAFLLENSTKNGKAVKIYVTEPRRISAISLANRVSQE-------- 701

  Fly   194 CSFQVGLHRPNSLED----------------TRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHE 242
                :|.:.|::...                |.|.|.|||..|..|.....:...||:::|||||
pombe   702 ----LGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVTTGTFLRLLEVGNEIESVTHLIIDEVHE 762

  Fly   243 RDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYFTTTNSIPPVITTNHRRKHSIEKFY 307
            |..:.|.|||.|..||..:. |:|||:||||::|::...||..:|.|     |...:.:.:.:||
pombe   763 RSIDSDLLLIHVLHLLKQHP-HLKIIIMSATLNAEKFQLYFEGSNLI-----TIPGKTYPVHRFY 821

  Fly   308 RDQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIIDNME---RKAAIQSRQSYD--------- 360
            .:.:.|...|::..|:            ||.:.::..|:.|   :.|:|.::.:.|         
pombe   822 LEDILSQFGNDKSFGN------------AAGQDVIEEDDYETDQQDASISNKSAEDAIVEMNLIP 874

  Fly   361 -----EALRYG-------------------AVLIFLPGIYEI---DTMAENLTCMLENDPNIKVS 398
                 :|:.||                   .||:|||||.||   .::.|::. |..|  :.|..
pombe   875 AWYNEKAINYGLIVYLLKYIFTEGDPKFSKCVLVFLPGISEILRVKSLIEDMP-MFRN--HRKFC 936

  Fly   399 IVRCFSLMTPENQRDVFNPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSS 463
            |....|.::...|:.|||.||.|.|||:|:|||||:.:|:|||:.|||..:.:....::....|.
pombe   937 IYMLHSTLSSAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSR 1001

  Fly   464 LRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMG 528
            |..|:.||||.:||:||.||::.|..|.:.:|..:..:...:..||:|||.||..||:.|:..||
pombe  1002 LTDTFVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMG 1066

  Fly   529 SPVEILALALSPPNLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRL 593
            ...::|..||.||:.::|...:..|.:||||         ..:..||..|..:|:||:|....::
pombe  1067 DVQDVLGKALDPPSSTNIIRALEKLHQVGAL---------SENEKLTKLGKFLSQLPVDANLGKI 1122

  Fly   594 IILGYIFNMLEEAIIIAAGLSTPGLFAHEGGRSQLGDSFWMH----YIFSDGSGSDLVAIWRVYL 654
            ::||..:..::.|..|.|.|:....|     |..:.:.|..:    ....:.:.||||.::..|.
pombe  1123 LVLGCFYKCVDAASSIVAMLTIGSPF-----RKSVDNEFSANKARLSFAKENTRSDLVLMYYAYC 1182

  Fly   655 TYLNIVEN--GHDQESAIRWAKRFHVSLRSLK-----EIHLLVQEL------------------R 694
            .:..|..:  |.|::|   :||..:::|.:|.     :|.|| .||                  |
pombe  1183 AWREICLSPLGPDEDS---FAKEKYLNLEALSMTESLKIQLL-SELKDMKLLGASDVDTCKSLKR 1243

  Fly   695 VRCTHLGLIPFPVNPNQMMDDREKAIMLKVIIAGAFYPNYFTRSKESCADTDRNIYQTISGHD-- 757
            ..|....:||...:.|.     ..|.:|..:||.:.|||...      .|.::..:.|:|.:.  
pombe  1244 SICRRFAVIPKEHDINS-----GNAEILCGVIAASLYPNILR------YDYEKRQWSTLSTNKRV 1297

  Fly   758 ----------------PCRTVYFTNFKPA-----YMGELYTRRIKELFQEVRIPPENMDVTFQEG 801
                            |.:.|.:||...:     |:.|.....:::|.....:..||. |:..:.
pombe  1298 RILDVSVNNRSELPNMPSKFVAYTNMMSSTRASEYVNETTMVTLRQLLMMCGLKVENR-VSVGQA 1361

  Fly   802 SQKVFVTFKQDDWIEGS 818
            ....|..:.::.::..|
pombe  1362 KLDNFTVYFENVYVSAS 1378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 203/667 (30%)
TUDOR 892..1016 CDD:395449
SPBC15C4.05NP_595925.1 DEXDc 637..820 CDD:214692 75/200 (38%)
DEXDc 650..793 CDD:238005 63/155 (41%)
Helicase_C 891..1022 CDD:278689 50/133 (38%)
HA2 1093..1177 CDD:214852 24/97 (25%)
OB_NTP_bind 1218..1349 CDD:285018 27/142 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 43 1.000 Domainoid score I3651
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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