DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-E and Dhx29

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_766182.2 Gene:Dhx29 / 218629 MGIID:2145374 Length:1365 Species:Mus musculus


Alignment Length:852 Identity:242/852 - (28%)
Similarity:398/852 - (46%) Gaps:145/852 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 TLDDLDTDDEGEETEIRRDDEYYKKFRFNLNRDKNLSIYAKREEILAAINAHPVVIIKGETGCGK 144
            :|:....:|......:.|..:...|::..|...:.|.::..|:.|:..:..|.||::.||||.||
Mouse   536 SLEPTSAEDLAPVRSLFRRLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGK 600

  Fly   145 TTQVPQYILDEAYK---SGKYCNIVVTQPRRIAAISIANRVCQEREWQ-----QNTVCSFQVGLH 201
            :||||.::|::...   ..:.||||.||||||:|:|:|.|||:|...:     :|::|.:|:.:.
Mouse   601 STQVPHFLLEDLLLDECGARKCNIVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRME 665

  Fly   202 RPNSLEDTRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVK 266
            ...| |.||||||||||||..|..:..|...:|:::||||||....||||::::.:|...| .:.
Mouse   666 SRAS-ESTRLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRS-DLH 728

  Fly   267 IILMSATIDAKELSDYFTTTNSIPPVITTNHRRKHSIEKFYRDQL---------------GSIIW 316
            :||||||:|:.:.|.|||..    |::..: .|.:.:|.|:.:.:               ...:.
Mouse   729 LILMSATVDSDKFSTYFTHC----PILRIS-GRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLE 788

  Fly   317 NEEDV------------GHQQV--------PEIN----KHGYRA----------------AVKII 341
            .||::            .:|:.        ||:|    |:..|.                .::::
Mouse   789 EEEEITINVTSKAGGVKKYQEYIPVQSGASPELNPFYQKYSSRTQHAILYMNPHKINLDLILELL 853

  Fly   342 VIIDNMERKAAIQSRQSYDEALRYGAVLIFLPGIYEIDTMAENLTCMLENDPNI---KVSIVRCF 403
            |.:|...:...|:           |||||||||:..|    :.|..:|.:|...   :..::...
Mouse   854 VYLDKSPQFRNIE-----------GAVLIFLPGLAHI----QQLYDLLSSDRRFYSERYQVIALH 903

  Fly   404 SLMTPENQRDVFNPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTW 468
            |:::.::|...|..||||.|||:|.|||||:.||:|||.:|||....|......:|..|||..|:
Mouse   904 SVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETF 968

  Fly   469 ASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPE----FGIPEMLRLPLQNSVLKAKVLNMGS 529
            .|||:..||.||.||:|.|..:|:     |.||..|    :.:||:||:||:...|.....::||
Mouse   969 VSKASALQRQGRAGRVRDGFCFRL-----YTRERFEGFLDYSVPEILRVPLEELCLHIMKCDLGS 1028

  Fly   530 PVEILALALSPPNLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLI 594
            |.:.|:.||.||.|..|.|.:.||:::||.        :|.:..||..|..::.||::.:..:::
Mouse  1029 PEDFLSKALDPPQLQVISNAMNLLRKIGAC--------EPNEPKLTPLGQHLAALPVNVKIGKML 1085

  Fly   595 ILGYIFNMLEEAIIIAAGLSTPGLFAHEGGRSQLGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNI 659
            |.|.||..||....:||.::....|....||....|........:|   ||.:.|:..||.:...
Mouse  1086 IFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSLAVAD---SDHLTIYNAYLGWKKA 1147

  Fly   660 VENGHDQESAIRWAKRFHVSLRSLKEIHLLVQELRVRCTHLGLIPFPVNPN-------QMMDDRE 717
            .:.| ...|.|.:.:|..::..||..:..:.|||.......|   |..:|:       |.:..::
Mouse  1148 QQEG-GFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVKAAG---FSSSPSWEGRKGPQTLSFQD 1208

  Fly   718 KAIMLKVIIAGAFYPN----YFTRS-----KESCADTDRNIYQTISGHDPCRTVYFTNFKPAYMG 773
            .| :||.::|...|.:    ..|:|     |.:|      :.:|..|...............|..
Mouse  1209 IA-LLKAVLAAGLYDSVGKIMCTKSVDVTEKLAC------MVETAQGKAQVHPSSVNRDLQTYGW 1266

  Fly   774 ELYTRRIKELFQEVRIPPENMDVTFQEGSQKVFVTFKQDDWIEGSSKYVPVSGRV--QSEVYKAV 836
            .||..:::  :..|.:....:...|.      .:.|..|..::...:.:.|.|.:  |:.|..||
Mouse  1267 LLYQEKVR--YTRVYLRETTLITPFP------VLLFGGDIEVQHRERLLSVDGWIYFQAPVKIAV 1323

  Fly   837 MMRQNRV 843
            :.:|.||
Mouse  1324 IFKQLRV 1330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 206/653 (32%)
TUDOR 892..1016 CDD:395449
Dhx29NP_766182.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..74
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..222
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 235..257
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..524
DEXDc 577..763 CDD:214692 79/192 (41%)
DEXDc 588..735 CDD:238005 66/148 (45%)
DEAH box. /evidence=ECO:0000255|HAMAP-Rule:MF_03068 701..704 2/2 (100%)
Helicase_C 863..984 CDD:278689 52/135 (39%)
HA2 1055..1136 CDD:214852 23/91 (25%)
OB_NTP_bind 1178..1298 CDD:285018 24/137 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D278674at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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