DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spn-E and Dhx37

DIOPT Version :9

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:XP_017176254.1 Gene:Dhx37 / 208144 MGIID:3028576 Length:1161 Species:Mus musculus


Alignment Length:918 Identity:231/918 - (25%)
Similarity:378/918 - (41%) Gaps:209/918 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 LSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKSGKYCNIVVTQPRRIAAISIA 179
            |.|.|:.:.|:.|:..||:||:.||||.||||||||::.:..| |.:...|.||:|||:||::::
Mouse   248 LPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGY-SSEDSIIGVTEPRRVAAVAMS 311

  Fly   180 NRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHERD 244
            .||.:|.......| |:|: .:..|..|:||:.:.|.||||..:..:..|..|..:::||.|||.
Mouse   312 QRVAKEMNLSHRVV-SYQI-RYEGNVTEETRIKFMTDGVLLKEIQKDFLLLKYKVVIIDEAHERS 374

  Fly   245 QNMDFLLIVVRRLLATNS-RH--VKIILMSATIDAKELSD---YFTTTNSIPPVITTNHRR---- 299
            ...|.||.::.|::|..: ||  :|:::||||:..::.:.   .|||.   ||||....|:    
Mouse   375 VYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQNQRLFTTP---PPVIKVESRQFPVT 436

  Fly   300 KHSIEKFYRDQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIIDNMERKAAIQSR-------- 356
            .|..::...|......:.:....|:.:|         |..|:|.:.......|:..|        
Mouse   437 VHFNKRTPLDDYSGECFRKVCKIHRMLP---------AGGILVFLTGQAEVHALCRRLRKAFPFR 492

  Fly   357 ----QSYDEALRYG-------------AVLIFLPGI------------------YEIDTMAENLT 386
                |..:|....|             |..:.||.|                  .|:|...|.|.
Mouse   493 CSQPQEKEEDSAEGMRRFKKSRTRARKAQAMALPQINLDNYSVLPAGEGDEDREAEMDDEEEALG 557

  Fly   387 CML-------------ENDPNIKVSIVRCFSLMTPENQRDVFNPPPPGFRKIILTTNIAESSITV 438
            ..|             :.|.::.:.::..:||:.||.|..||.|||.|.|..::.||:||:|:|:
Mouse   558 SDLDLDLGDSEANEGEQPDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTI 622

  Fly   439 PDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMP 503
            |.:.||:|....|.:..|..:..||.|:||.|:|:..|||||.||...|..||:.:...: .:..
Mouse   623 PGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF-GDFE 686

  Fly   504 EFGIPEMLRLPLQNSVLK------AKVLNMGSPVEILALALSPPNLSDIHNTILLLKEVGALY-- 560
            :|..||:.|.|:::.:|:      .||:|...|        :||::..:.....||..:|||.  
Mouse   687 QFPPPEITRRPVEDLILQMKALSIEKVINFPFP--------TPPSVEALVAAEELLVALGALQAP 743

  Fly   561 --------LTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFNMLEEAIIIAAGLSTPG 617
                    |.:..:..|    :|..|..||..|:..|.::::.|......|...|.|.|.::...
Mouse   744 PKQERMKKLQMSQLSCP----ITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRE 804

  Fly   618 LFAH--------------EGGRSQLGD--SFWMHYIFSDGSGSDL-VAIWRVYLTYLNIVENG-- 663
            ||..              :|.|:::..  ..|.      |.|..| :....|.|..:...|..  
Mouse   805 LFEELDRPAASEKELAELKGRRARVAQMKRTWA------GQGPSLKLGDLMVLLGAVGACEYAGC 863

  Fly   664 ---HDQESAIRWAKRFHVSLRSLKEIHLLVQELRVR----CTHLGLIPFPVNPNQMMDDREKAIM 721
               ..|.:.:|:        :::.||..|..:|...    |...||.   ::|........:...
Mouse   864 SPQFCQANGLRY--------KAMLEIRRLRGQLTTAVNAVCPEAGLF---LDPKMQPPTESQVTY 917

  Fly   722 LKVIIAGAFYPNYFTR-SKESCADTD-RNIYQTISGHDPCRTVYFTNFKPAYMGELYTRRIKELF 784
            |:.|:|.....:...| ..|...|.. :|.|:|....||                ::......||
Mouse   918 LRQIMAAGLGDHLARRVQSEDLLDPKWKNAYKTPLLDDP----------------VFIHPSSVLF 966

  Fly   785 QEVRIPPENMDVTFQE--GSQKVF---VTFKQDDWI---------------EGSSKYVPVSGRV- 828
            :|:   ||  .|.:||  .:.|::   |:..:..||               |.:..|.|.||:| 
Mouse   967 KEL---PE--FVVYQEIVETTKMYMKGVSTVEIQWIPSLLPSYCQFDAPLEEPAPSYCPESGQVL 1026

  Fly   829 --QSEVYKAV--MMRQNRVERPIHIMNPSAFMSYVQQRGIGDVIEGRWIPPTKPLNVELLALPSV 889
              ::.|:..|  .:...:|:.|..|.....|..:        ::||:...........||:.||.
Mouse  1027 CHRASVFYRVGWPLPAVQVDFPEGIDRYKYFAKF--------LLEGQVFRKLASFKSCLLSSPST 1083

  Fly   890 FDKTISGS 897
            ..||.:.|
Mouse  1084 MLKTWASS 1091

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 183/689 (27%)
TUDOR 892..1016 CDD:395449 3/6 (50%)
Dhx37XP_017176254.1 HrpA 236..1009 CDD:224557 210/826 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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