DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-E and dhx34

DIOPT Version :10

Sequence 1:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster
Sequence 2:NP_001121459.1 Gene:dhx34 / 100158553 XenbaseID:XB-GENE-1009178 Length:1133 Species:Xenopus tropicalis


Alignment Length:731 Identity:199/731 - (27%)
Similarity:329/731 - (45%) Gaps:150/731 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 NLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKSGKYCNIVVTQPRRIAAISI 178
            :|.|:..:|:|::.::.|.||::.|:|||||:||||||:|     :..:.:|..|||||||.||:
 Frog   153 SLPIFQYKEKIISMVHKHQVVVVAGDTGCGKSTQVPQYLL-----AAGFGHIACTQPRRIACISL 212

  Fly   179 ANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHER 243
            |.||..|...|..:...:|:......| ..|::::.|.|:||..:..:.||..|..|::||||||
 Frog   213 AKRVGFESLNQYGSKVGYQIRFESSRS-PATKIVFITEGLLLRQIQRDSTLPQYQVIIVDEVHER 276

  Fly   244 DQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYFTTTNSIPPVITTNHRRKHSIEKFYR 308
            ..:.||||.|:|:||.... .:|:|||||||:.|..|.||...    ||:.. ..|...|:..|:
 Frog   277 HLHSDFLLGVLRQLLILRP-DLKVILMSATINIKLFSGYFEQA----PVLQV-PGRLFPIQVIYQ 335

  Fly   309 DQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIIDNMERKAAIQSRQSYDEALRYGAVLIFLP 373
            .     |..||.|...:  :::...|...::            ||..:...||.   |.:||||.
 Frog   336 P-----IPQEETVSKSE--KLDPRPYLHVLQ------------AIDHKYPPDER---GDLLIFLS 378

  Fly   374 GIYEIDTMAENLTCMLENDPNIKVSIVRCFSLMTPENQRDVFNPPPPGFRKIILTTNIAESSITV 438
            |:.||.::.|.:.....:..  :..::...|.::..:|..||:..|.|.||.|::|||||:|:|:
 Frog   379 GVTEISSVQEAVQVYATHTQ--RWIVLPLHSTLSIADQDKVFDLAPVGVRKCIISTNIAETSVTI 441

  Fly   439 PDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMP 503
            ..|.:|:|....|....|..:....|:..|.|:|:..||.||.||...|..||:..:..|....|
 Frog   442 DGVRFVLDSGKVKEMSFDPKAKMQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSP 506

  Fly   504 EFGIPEMLRLPLQNSVLKAKVLNMGSPVEILALALSPPNLSDIHNTILLLKEVGALYLTVDGIYD 568
             :.:||:.|:.|.:.||:.|.:.:|:|...  ..:..|::|.|...|..|::.|||         
 Frog   507 -YPVPEIQRVALDSLVLQMKSMELGNPRHF--PFIEQPSMSSIETAIFYLRDQGAL--------- 559

  Fly   569 PLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFNMLEEAIIIAAGLS--TPGL----------FAH 621
            .::.:||..|.::::||:|....:::|||.:|:::|..:.||:.||  :|.|          .|.
 Frog   560 DINEELTPIGKLLAKLPVDVVIGKMLILGSLFSLVEPVLTIASALSVQSPILRNSTSNPEWGTAR 624

  Fly   622 EGGRSQLGDSFWMHYIFSDGSGSDLVAIW-----------------------RVY---------- 653
            :...|:.||.|.:..||::         |                       |:|          
 Frog   625 KPLESEHGDPFTLLNIFNE---------WVQVKANQRSNSRKWCRRRGLEEQRLYEMANLRRQFK 680

  Fly   654 -------LTYLNIVENG--------HDQESAIRWAKRFH--VSLRSLKEIHLL------------ 689
                   |...|:.:.|        |.:...:...||.|  |..|..|.:.|.            
 Frog   681 ELLKDHGLLEENVAQRGDRNSRQRQHKERKELHQLKRQHERVEKRKRKVLKLQDEGAGSSSDGEE 745

  Fly   690 ----------------VQELRVRCTH-LGLIPFPVNPNQMMDDREKAIMLKVIIAGAFYPNY-FT 736
                            :|:::.:..| :..:....:..|.:..:|.: :||:|:....||.. ..
 Frog   746 QYHTEKHRKDRKDSIDIQDVKFKLRHNIHELHASSSTGQDLSSQEVS-LLKLIVCHGLYPQLGVP 809

  Fly   737 RSKESCADTDRNIYQT 752
            .|..||......::.|
 Frog   810 DSFNSCRKDSDQVFHT 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-ENP_476741.1 HrpA 114..>697 CDD:441249 187/672 (28%)
DEXHc_TDRD9 115..295 CDD:350746 74/179 (41%)
TUDOR 892..1016 CDD:425754
dhx34NP_001121459.1 HrpA 152..>616 CDD:441249 165/510 (32%)
OB_NTP_bind 794..903 CDD:400182 9/32 (28%)
Blue background indicates that the domain is not in the aligned region.

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