DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4576 and ndg-4

DIOPT Version :9

Sequence 1:NP_650495.1 Gene:CG4576 / 41914 FlyBaseID:FBgn0038366 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001022618.1 Gene:ndg-4 / 175582 WormBaseID:WBGene00003577 Length:687 Species:Caenorhabditis elegans


Alignment Length:663 Identity:132/663 - (19%)
Similarity:231/663 - (34%) Gaps:163/663 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 YDLDDYDRCLQ-----ELNGQASTYCFVRAEVQPDESVAAWRAIAEISQYDRHHFDHRQLYFGLC 97
            |.|.||:.|..     ..:||   ||.:..|| ||..|          :......|...:..|:|
 Worm   133 YWLGDYELCAALASDGSFDGQ---YCRIEMEV-PDAGV----------ESGCPQTDPLSIILGVC 183

  Fly    98 LRECEASLAGLNKSELEALQAGLLSENAKVNVYLDLFSMEANNRQRHQRLTNACLNWRLQRRGFG 162
            ..      :..:.::|..:.:..|..|.||       ..|:.||                     
 Worm   184 FP------SACSVADLTTVSSIYLPYNLKV-------ECESQNR--------------------- 214

  Fly   163 VLAKSVVEYCDEAGHQVEDDAWNLTFYGILGTLLVLACLGSLVDLHLKRSRHDKMLKERDHYKTP 227
                                 |  :|..:|..::::..:........:.|.:|.:|   ..:..|
 Worm   215 ---------------------W--SFVTVLLLIILMVWIVPQAVATFQTSSNDSIL---SCFSIP 253

  Fly   228 PKSTAQQVLLTFSVARNWYRLNQEPSGKIGRELRFLDCFKFFAM-------FMVIFAHTNWVIYE 285
            ..:..     |||..|      :.|:..:...|.||   .||.:       ||:.:.......:|
 Worm   254 DNAKR-----TFSTRR------ESPNLHVVHGLEFL---LFFTIVSGMVYNFMLPYIENVAFAFE 304

  Fly   286 SAISNPQDPERLLHTAAGTLLVSGSLITVTFFVISGLLLTINWLAVSRSLESKKDTWSFGQYALL 350
            ...|.|      :|...........|:.::.|..:.||                    ||....|
 Worm   305 GVSSFP------MHIVNNYSYQIDGLLALSAFYTTYLL--------------------FGNILTL 343

  Fly   351 FVKFN--IFRYIRLTVPYAFVLLMSGVYFEN-AGGPLWRHIFEREQLACRRNWWTNLLYVNNFVR 412
            ...|:  :.|..|....|...:|...|.|.. :.||:|.|.....:  |...||.|:|::||:..
 Worm   344 RSAFDYILMRLFRFWPAYIVCVLFMYVIFPGVSSGPMWIHTDTVNR--CGSGWWKNILFINNWFN 406

  Fly   413 TDERCLLQGWYLAADTHSFVLSLVLLMLGHRFVRWSKQLYA-GILGLFVVVPMVLTYAMNYYP-- 474
            ..:.|:..|:.::.:...:.:.:.::.|..::...: ||:| .:.|..::...|..|:....|  
 Worm   407 VTDTCVDIGYVISMEAQYYAILIFVIFLSSKYPLLT-QLFAYTVFGSSIIFSFVRAYSQELPPAP 470

  Fly   475 --IFVPTPQTQKDSFIGDRQFTEFYTSSFMNFGSYFCGVLAALVYDQLALK--QYKLRELKSFQL 535
              ...|.|.|:..:.......:.|..||....|..| |:..|...|:|...  .|.:.:|.:...
 Worm   471 MLTLEPVPLTKVYAVFDQLLLSLFARSSNYCLGFIF-GIGCATASDELRESGLSYCMHKLLAIIC 534

  Fly   536 LWFTLIP-VGILWLFSAHPIFQHYYVTPSAIWGALYAGLQRNIWGFGLGIFIV----GMASKVGW 595
            :.|.::| ||      |.|...:.:|:...|..|.||.|.|.:|.|.|..|:.    |..|| .|
 Worm   535 IAFAVVPFVG------AFPYSAYAWVSNFEIMNASYAALHRPMWSFALLSFVYLCHHGAFSK-EW 592

  Fly   596 I-----FRKFCCLPIFRILGRLTYGAFIVHLLVARIVLATVREPIYFGTGMMFAFIFFTVTVSYL 655
            :     :|      :|..|.::|:.|.:|...:.....:::.:|.|............|..::|.
 Worm   593 LNALLEWR------VFAPLSKVTWIALVVAEPIILYFFSSLNKPAYATHWSTMYTAISTALLAYF 651

  Fly   656 CSFLLAIFLELPV 668
            .:..|.||:..|:
 Worm   652 VAMFLDIFVTRPI 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4576NP_650495.1 Acyl_transf_3 260..657 CDD:280013 91/423 (22%)
OafA 303..668 CDD:224748 83/384 (22%)
ndg-4NP_001022618.1 NRF 110..215 CDD:214781 25/150 (17%)
OafA 325..668 CDD:224748 83/377 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11161
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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