DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-IIb and AT5G13980

DIOPT Version :10

Sequence 1:NP_650494.2 Gene:alpha-Man-IIb / 41913 FlyBaseID:FBgn0026616 Length:1249 Species:Drosophila melanogaster
Sequence 2:NP_196902.2 Gene:AT5G13980 / 831246 AraportID:AT5G13980 Length:1024 Species:Arabidopsis thaliana


Alignment Length:1156 Identity:280/1156 - (24%)
Similarity:472/1156 - (40%) Gaps:270/1156 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 LKIIVVPHSHNDPGWLKTFTNYFQSDS--------RQILNLLVTKMQEYTDMTFIWSEISFLQLW 224
            |.:.||||||:|.|||||...|:...:        :.:|:.:|..:....:..||:.|.:|.|.|
plant    37 LNVHVVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSIVPALLADKNRKFIYVEQAFFQRW 101

  Fly   225 WDQAHPTKQRALKRLIDAGRIEITTGGWVMTDEANVHIYPMLDQLIEGHQWLKNNLNVTPKVGWS 289
            |::.....:|.:|.||.:|::|:..||..|.|||..|...|:||...||:::....||||::||.
plant   102 WNEQSEEIKRIVKELIHSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRFIIREFNVTPRIGWQ 166

  Fly   290 IDPFGHGSTVPYLLSG-ANFEGTIIQRIHYAWKQWFARQQSGDFIWKPYWRSRKDKDSE----AG 349
            ||||||.:...|||.. ..|:.....||.|..::...::::.:.|    ||..|...|.    ||
plant   167 IDPFGHSAVQAYLLGAEVGFDSVFFGRIDYQDREKRYKEKTLEVI----WRGSKSLGSSSQIFAG 227

  Fly   350 SLLTHNMPFDIYSIKGSCGPHPFICLNFDFRKIP--GEYTEYSVKAQFITDD------NLESKAQ 406
            :..|:..|                         |  |.|.|.:..:..:.||      |::.:..
plant   228 AFPTNYEP-------------------------PPGGFYYEITDDSPVVQDDPDLFDYNVQERVN 267

  Fly   407 LLLEQYARTASLFPHNVALIPVGDDFRYNKDREVDQQYQNYKKLIDHIMANRRLYNADIRFGTPS 471
            ..:......|::...|..:..:|.||||   :.....|:...|||.::..:.|: ||  .:.|||
plant   268 AFVAAALDQANITRINHIMFTMGTDFRY---QYAHTWYRQMDKLIHYVNLDGRV-NA--FYSTPS 326

  Fly   472 DYFEAIKERMKDHTPGFPTFKGDFFVYSDIFSEGRPAYWSGYFTTRPFYKLLSSELEHQLRSAEI 536
            .|.:| |....:   .:|....|:|.|:|..:    |||:||||:||       .|:..:|    
plant   327 IYTDA-KHAANE---AWPLKTEDYFPYADRIN----AYWTGYFTSRP-------ALKRYVR---- 372

  Fly   537 VFTLAYNTARQAKRENAIKIYEKNYELIINARRNLGLFQHHDAITGTSKAAVMRDYAMRL---FE 598
            |.:..|..|||.:..........|.:.:.:|   |.:.|||||::||||..|..|||.||   :.
plant   373 VMSAYYLAARQLEFFKGRSQKGPNTDSLADA---LAIAQHHDAVSGTSKQHVANDYAKRLAIGYV 434

  Fly   599 STQNMVKMQESCLELLLQKGQPRHHGFLLSEFERDNFNKLPRKMPIQMANGDESTPTVPAGEGGA 663
            ..:::|....:.|..:.....|.....||.     |.:..| ...:.:::|.             
plant   435 EAESVVATSLAHLTKVDPTLNPTFQQCLLL-----NISYCP-SSEVNLSDGK------------- 480

  Fly   664 GGSSSSGSVGSFVL--YNSLAQKRLEVVTLRVQHPNVKIVNDKGVELNHIQINPVWNITDTYEQG 726
                      |.::  ||.|..||:::|.|.|...:|.:.:.:|.|:.. |:.|   .||.|...
plant   481 ----------SLIVLAYNPLGWKRVDIVRLPVVGGDVSVHDSEGHEVES-QLVP---FTDEYVAL 531

  Fly   727 LGTSVSGTVGRIRTSTRQFEVMFVAELEPLSLSTYRV----QVDEVNFKRNIATIYCDDCTESQP 787
            ....|...:|:..|...::.::|...:.||..:||.:    :.|..:.|..::.|          
plant   532 RKYHVEAYLGQSPTQVPKYWLVFSVTVPPLGFTTYTISTAKKTDGYSSKSYVSNI---------- 586

  Fly   788 ASVSPPEEIESSPTSVFEARGKPAGDIQLENPHMRLLFDEKSGFLKTITRKNQKKELLKPLQCNI 852
                              .:|:.: .|.:.:.|::|.|....|  ..|...|.:..:.:|::...
plant   587 ------------------LKGEQS-IINIGHGHLKLSFSTDQG--TAINYVNGRTSMTEPVKQTF 630

  Fly   853 K-FAAYRSAQ-------FHSGAYLFK---TDPEQSEAEKEVLEGYTDMRIIITSGPIASDVTVIY 906
            . ::||..:.       .:||||:|:   |.|...|.:         :.:.:..||:..:|....
plant   631 SYYSAYNGSNDKEPLIPQNSGAYVFRPNGTFPINPEGQ---------VPLTVIHGPLVDEVHQQI 686

  Fly   907 GPFLAHTVRIFNTRTHLDAAIYVEN-DIDFEPPPKNRETELFMRFVTNIDNIAQAPMQRDPLKEP 970
            .|:::...|::..:.|::....|.| .||                    |.|.         ||.
plant   687 NPWISQITRVYKGKEHVEVEFIVGNIPID--------------------DGIG---------KEV 722

  Fly   971 VD--AATMPELPVFYSDQNGFQYHERIK-----------VPAIGIEGNYFPITSGAFIQDSRLRL 1022
            |.  ::::.....||:|.:|..|.:||:           .|   |.|||:||..|.::|||:...
plant   723 VTQISSSLKSNKTFYTDSSGRDYIKRIRDYRSDWKLDVNQP---IAGNYYPINHGIYLQDSKKEF 784

  Fly  1023 TLLTTHAQGAASYEPGQLEVMLDRRTLYDDYRGMGEGVVDSRLTRHK-FWLLVEDLPGGQHVTQP 1086
            :::...|.|.:|...||:|:||.||.|.||.||:.|.:.::...:.| ..|.::    |::..:.
plant   785 SVMVDRAFGGSSIVDGQVELMLHRRLLLDDSRGVAENLNETVCVQDKCTGLTIQ----GKYYYRI 845

  Fly  1087 PSYKVLSQQAQQLANALRYPPNLYFVSNLEQPELAAALLPLVRLLPKGPLPCDVHLTTLRTLSDP 1151
            ..|...::..:.....:..|..|.|....:...::........:.|...||.:|.|.||:.|.|.
plant   846 DPYGEGAKWRRTFGQEIYSPLLLAFAQQDDGKPMSFGAASFSGIDPSYSLPDNVALLTLQELDDG 910

  Fly  1152 ELQLFPSASALLVLHRQGFDCSVSAGRELSMEAICPLSSKGLGNVQLGRL----SLHTIEATSLT 1212
            .           ||.|......|...:|||          |:.:|:|.:|    .:..:...||:
plant   911 N-----------VLLRLAHLYEVEEDKELS----------GVASVELKKLFPGKKIGKLTEMSLS 954

  Fly  1213 GTEQKSSRE------------SYHIRSLA-----------EISLEPMELRT 1240
            ..:::|:.|            ||.....|           |:.|.|||:||
plant   955 ANQERSTMEKKRLVWKVEGEGSYGEEKKAKRGREIDPRKLEMELYPMEIRT 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IIbNP_650494.2 PLN02701 148..1246 CDD:178304 280/1156 (24%)
AT5G13980NP_196902.2 PLN02701 36..820 CDD:178304 238/944 (25%)
GH38N_AMII_LAM_like 37..313 CDD:212121 87/307 (28%)

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