DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-IIb and Man2b1

DIOPT Version :9

Sequence 1:NP_001262614.1 Gene:alpha-Man-IIb / 41913 FlyBaseID:FBgn0026616 Length:1249 Species:Drosophila melanogaster
Sequence 2:XP_006255335.1 Gene:Man2b1 / 361378 RGDID:3039 Length:1021 Species:Rattus norvegicus


Alignment Length:1161 Identity:267/1161 - (22%)
Similarity:455/1161 - (39%) Gaps:299/1161 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 LKIIVVPHSHNDPGWLKTFTNYFQSDSRQILNLLVTKMQE-----------------YTDMT--F 213
            |.:.::||:|:|.|||||...|:......:|..:...|.:                 ..|.|  |
  Rat    63 LNVHLLPHTHDDVGWLKTVDQYYYGMDPHLLTFMPIVMSDVQHASVQYILDSVIYSLLNDPTRRF 127

  Fly   214 IWSEISFLQLWWDQAHPTKQRALKRLIDAGRIEITTGGWVMTDEANVHIYPMLDQLIEGHQWLKN 278
            |:.|::|...||.|.....|.|::.|:..||:|...|||||.|||..|...::||:..|.::|::
  Rat   128 IYVEMAFFSRWWKQQTNVTQDAVRNLVRQGRLEFVNGGWVMNDEAATHYGAIVDQMTLGLRFLQD 192

  Fly   279 NL--NVTPKVGWSIDPFGHGSTVPYLLSGANFEGTIIQRIHYAWKQWFARQQSGDFIWKPYWRSR 341
            ..  :..|:|.|.||||||......|.:...|:|..:.||.|..|  |.|::.  ...:..||:.
  Rat   193 TFGSDGLPRVAWHIDPFGHSREQASLFAQMGFDGFFLGRIDYQDK--FNRKRK--LKMEELWRAS 253

  Fly   342 KDKDSEAGSLLTHNMPFDIYSIKGSCGPHPFICLNFDFRKIPGEYTEYSVKAQFITDD--NLESK 404
            ......|..|.|..:|       .:..|...:|.:......|            :.||  :.|..
  Rat   254 ASLKPPAADLFTGVLP-------NNYNPPKDLCWDVLCTDPP------------VVDDPTSPEFN 299

  Fly   405 AQLLLEQYARTAS----LFPHNVALIPVGDDFRYNKDREVDQQYQNYKKLIDHIMANRRLYN--- 462
            |..|::.:...||    .:..|..::.:|.||:|   ...:..::|..|||       ||.|   
  Rat   300 ANKLVDYFLNLASSQKKYYRTNHTVMTMGSDFQY---ENANMWFKNMDKLI-------RLVNEQQ 354

  Fly   463 ------ADIRFGTPSDY-FEAIKERMKDHTPGFPTFKGDFFVYSDIFSEGRPAYWSGYFTTRPFY 520
                  ..:.:.|||.| :|..|..:.     :...:.|||.|:|    |...:|:|||::||..
  Rat   355 QANGSKVHVLYSTPSCYLWELNKANLT-----WTVKEDDFFPYAD----GPHMFWTGYFSSRPAL 410

  Fly   521 KLLSSELEHQLRSAEIVFTLAYNTARQAKRENAI-----KI--YEKNYELIINARRNLGLFQHHD 578
            |...              .|:||..:...:..|:     |:  |.......:|  ..:.:.||||
  Rat   411 KRYE--------------RLSYNFLQVCNQLEALVGPEAKVGPYGSGDSAPLN--EAMAVLQHHD 459

  Fly   579 AITGTSKAAVMRDYAMRLFESTQNMVKMQESCLELLLQKGQPRHHGFLLSEFERDNFNKLPRKMP 643
            |:|||::..|:.|||.:|...       ...| |:|:.....|     ||.: :.||: ..|::.
  Rat   460 AVTGTARQNVVNDYAKQLAAG-------WGPC-EVLVSNALAR-----LSLY-KQNFS-FCREIN 509

  Fly   644 IQMANGDESTPTVPAGEGGAGGSSSSGSVGSFVLYNSLAQKRLEVVTLRVQHP------NVKIVN 702
            |.:.         ||        |.:......::||.:.:|    |.|.|:.|      .||..|
  Rat   510 ISIC---------PA--------SQTSEHFRVIIYNPVGRK----VDLMVRLPVSEGIFLVKDPN 553

  Fly   703 DKGVELNHIQINPVWNITDTYEQGLGTSVSGTVGRIRTSTRQFEVMFVAELEPLSLSTYRV-QVD 766
            |:.:..|.:.:...:                      :.|.|:|::|.|.:..|..|.|.| ::.
  Rat   554 DRRISSNVVMVPSAY----------------------SKTYQWELLFPASVPALGFSIYSVNKMS 596

  Fly   767 EVNFKRNIATIYCDDCTESQPASVSPPEEIESSPTSVFEARGKPAGDIQLENPHMRLLFDEKSGF 831
            ..|.:.:..|              :.|::.:|..             :.:||.::|..||..:|.
  Rat   597 GHNHQAHNLT--------------ARPKKSKSRV-------------LVIENKYIRATFDSDTGL 634

  Fly   832 LKTITRKNQKKELLKPLQ-----CNIKFAAYRSAQFHSGAYLFKTDPEQSEAEKEVLEGYTDMRI 891
            |:.|  :|.::.:..|::     .|.......|.| .||||:|:    .|..:...:..:..:.:
  Rat   635 LRKI--ENLEQNISLPVRQGFFWYNASAGDEESPQ-ASGAYIFR----PSHRKPLPVSHWAQVTL 692

  Fly   892 IITSGPIASDVTVIYGPFLAHTVRIFNTRTHLDAAIYVENDIDFEPPPKNRETELFMRFVTNIDN 956
            :.|:  :..:|...:..:.:..:|::..:.||:    :|..:...|...:...|:..||.|.:..
  Rat   693 VKTN--LVQEVHQNFSAWCSQVIRLYEGQRHLE----LEWTVGPIPVKDDWGKEVISRFNTPMRT 751

  Fly   957 IAQAPMQRDPLKEPVDAATMPELPVFYSDQNGFQYHER-----------IKVPAIGIEGNYFPIT 1010
            ..|                      |::|.||.:..:|           ...|   :.|||:|:.
  Rat   752 RGQ----------------------FFTDSNGREILKRRDDFRPTWTLNQTEP---VAGNYYPVN 791

  Fly  1011 SGAFIQDSRLRLTLLTTHAQGAASYEPGQLEVMLDRRTLYDDYRGMGEGVVDSRLTRHKFWLLVE 1075
            :..:|.|..::||:||..:||.:|...|.||:|:.||.|.||.||:.|.::::.         ..
  Rat   792 TRIYITDGHMQLTVLTDRSQGGSSLLDGSLELMVHRRLLVDDERGVAEPLLETD---------TG 847

  Fly  1076 DLPGGQHVTQPPSYKVLSQQAQQLANALRYPPNLYFVS------NLEQPELAAALLPLVRLLPKG 1134
            |...|:|:....|....:.:.:.||......|.:....      :.:.|::..:.|       :.
  Rat   848 DKVRGRHLVILSSVSDAAARHRLLAEQEVLAPQVVLAHGGSSPYHSQAPKMQFSAL-------RR 905

  Fly  1135 PLPCDVHLTTLRTLSDPELQLFPSASALLVLHRQGFDCSVSAGRELSMEAICPLSSKGLGNVQLG 1199
            .||..|||.||.......|        ||.|..| |.....:.|.||......|.:      ...
  Rat   906 ELPPQVHLLTLARWGPKML--------LLRLEHQ-FAVKEDSNRNLSSPVTLNLQN------LFK 955

  Fly  1200 RLSLHTIEATSLTGTEQKS--SR---------ESYHIRSLAE---ISLEPMELRTF 1241
            ..:::.::.|:|...:..|  ||         .||...|..:   |:|:||::|||
  Rat   956 TFTINYLQETTLAANQPLSRVSRLKWMTDTGPISYPAPSRLDPTSITLQPMQIRTF 1011

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IIbNP_001262614.1 PLN02701 148..1246 CDD:178304 267/1161 (23%)
GH38N_AMII_GMII_SfManIII_like 167..514 CDD:212120 101/382 (26%)
Alpha-mann_mid 508..596 CDD:286360 26/94 (28%)
Glyco_hydro_38C 813..1241 CDD:285047 101/463 (22%)
Man2b1XP_006255335.1 GH38N_AMII_LAM_like 63..351 CDD:212121 86/320 (27%)
Alpha-mann_mid 399..477 CDD:214875 26/93 (28%)
Glyco_hydro_38C 617..1011 CDD:285047 101/462 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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