DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-IIb and LManI

DIOPT Version :9

Sequence 1:NP_001262614.1 Gene:alpha-Man-IIb / 41913 FlyBaseID:FBgn0026616 Length:1249 Species:Drosophila melanogaster
Sequence 2:NP_001260350.1 Gene:LManI / 34436 FlyBaseID:FBgn0032253 Length:950 Species:Drosophila melanogaster


Alignment Length:1169 Identity:286/1169 - (24%)
Similarity:471/1169 - (40%) Gaps:324/1169 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 LKIIVVPHSHNDPGWLKTFTNYFQSDSRQ--------ILNLLVTKMQEYTDMTFIWSEISFLQLW 224
            :.:.:|||||:|.|||||...|:.....:        ||:.:|.::.:.:...||..|..|...|
  Fly     2 INVHLVPHSHDDVGWLKTVDQYYYGSQNKIQHAGVQYILDTVVEELLKDSSRRFIQVETFFFAKW 66

  Fly   225 WDQAHPTKQRALKRLIDAGRIEITTGGWVMTDEANVHIYPMLDQLIEGHQWLKNNLN--VTPKVG 287
            :.:...|.|||:|:|:..||:|...|.|.|.|||.||...::||...|.::||:...  ..|.||
  Fly    67 YSEQTETVQRAVKKLVAQGRLEFAGGAWSMNDEATVHYQSVVDQFNLGLRYLKDTFGDCGRPTVG 131

  Fly   288 WSIDPFGHGSTVPYLLSGANFEGTIIQRIHYAWKQWFARQQSGDFIWKPYWRSR---KDKDSEAG 349
            |.||||||...:..:.:...|.|....|:.|..|    :|:..|...:..|:|.   |:.:...|
  Fly   132 WQIDPFGHSREMASIFAQMAFNGEFFARMDYVDK----KQRMLDLEMEMIWQSSESLKNSNIFTG 192

  Fly   350 SLLTHNMPFDIYSIKGSCGPHPFICLNFDFRKIP---GEYTEYSVKAQFITDDNLESKAQLLLEQ 411
            .|..|      ||..      |..|.:.:....|   ||  .|        |:|::::....::.
  Fly   193 MLYNH------YSAP------PGFCFDINCEDAPIIDGE--SY--------DNNVDARVSEFIDY 235

  Fly   412 YARTASLFPHNVALIPVGDDFRYNKDREVDQQYQNYKKLIDHIMANRRL---YNADIRFGTPSDY 473
            ....:..:.....::|:||||:| :|..|:  ::|..|||.::  |.|.   ...::.:.|||.|
  Fly   236 VKNMSKSYRSTHIMVPMGDDFQY-EDAAVN--FKNMDKLIKYV--NDRQSTGSQVNVFYSTPSCY 295

  Fly   474 FEAIKERMKDHTPGFPTFKGDFFVYSDIFSEGRPAYWSGYFTTRPFYKLLSSELEHQLRSAEIVF 538
            ...:.:..:.    :|....|||.||   |:.. :||:||||:||..|....:..|..::.:.:.
  Fly   296 LYELHQLKQT----WPNKTEDFFPYS---SDSH-SYWTGYFTSRPTQKRFHRDGNHFFQTVKQLS 352

  Fly   539 TLAYNTARQAKRENAIKIYEKNYELIINARRNLGLFQHHDAITGTSKAAVMRDYAMRLFE----- 598
            .||..:..|         |.::.:   |..:.:|:.|||||:|||.|.||..||...||:     
  Fly   353 VLANLSGTQ---------YSEDLD---NLSQAMGIMQHHDAVTGTEKQAVASDYDRLLFKAIVGA 405

  Fly   599 ---------STQNMVKMQ-ESCLELLLQKGQPRHHGFLLSEFERDNFNKLPRKMPIQMANGDEST 653
                     |..|:...: ||||||.:.          :..|.:|..|.:               
  Fly   406 ENSARDALRSLTNLTSGEFESCLELNIS----------VCAFTQDTANNV--------------- 445

  Fly   654 PTVPAGEGGAGGSSSSGSVGSFVLYNSLAQKRLEVVTLRVQHPNVKIVNDKGVELNHIQINPV-W 717
                                ...|.|.||....:.|.:..::.|..:.::||.|: ..::.|| |
  Fly   446 --------------------IVTLVNPLAHSSTQYVRVPAKNENYIVTDEKGREV-FSEVVPVPW 489

  Fly   718 NITDTYEQGLGTSVSGTVGRIRTSTRQFEVMFVAELEPLSLSTYRVQVDEVNFKRNIATIYCDDC 782
            .:.....              |.:..|.|::|.|.::.::....||    :...:|||       
  Fly   490 QVLALEH--------------RPNDTQHELVFEASVDKIANFLIRV----LPSPKNIA------- 529

  Fly   783 TESQPASVSPPEEIESSPTSVFEARGKPAGDIQLENPHMRLLFDEKSGFLKTITRKNQKKELLKP 847
             |.|   |..|.|             :...::.:|...::|.||..:|.|||: :.|...|    
  Fly   530 -EDQ---VQFPVE-------------RSQDELTVETSLVKLTFDTTTGGLKTV-KMNGFTE---- 572

  Fly   848 LQCNIK-----FAAYR-----SAQFHSGAYLFKTDPEQSEAEKEVLEGYTDMRII-------ITS 895
               ||:     :..||     |....||||:|:.              |.|:.|:       ..:
  Fly   573 ---NIQQTFGIYKGYRGNNGESKNRSSGAYVFRP--------------YGDIEIVNNKVELSFYN 620

  Fly   896 GPIASDVTVIYGPFLAHTVRIFNTRTHLDAAIYVENDIDFE----PPPKNRET--ELFMRFVTNI 954
            |....:|......:::..:||:..          .|.::||    |.|.:.:.  |:..||.:||
  Fly   621 GTKVKEVHQHVNEWISQVIRIYED----------VNRVEFEWLVGPIPTDDDVGKEIITRFSSNI 675

  Fly   955 DNIAQAPMQRDPLKEPVDAATMPELPVFYSDQNGFQYHERIK------VPAI--GIEGNYFPITS 1011
            .:..:                      ||:|.||.:..||.:      .|.:  .|.|||:|:|.
  Fly   676 SSKGK----------------------FYTDSNGREILERERNQREHFTPDMSEAISGNYYPVTG 718

  Fly  1012 GAFIQDSRLRLTLLTTHAQGAASYEPGQLEVMLDRRTLYDDYRGMGEGVVDSR-----LTRHKFW 1071
            ...:||...|:|||...|||..|.:.|:||:||.||.|.||..|:||.:.:::     :.|.|.:
  Fly   719 QISLQDDEKRITLLNDRAQGGTSLKDGELELMLHRRLLNDDAFGVGEALNETQYGTGLIARGKIY 783

  Fly  1072 LLVEDLPGGQHVTQPPSYKVLSQQAQQLANALRYPPNLYFVSNLEQPELAAALLPLVRLLPK--G 1134
            |:::.:.|      .|:.::|..|..|           :|.....:....|::..  .::|.  |
  Fly   784 LILDAVDG------KPNQRLLQHQLDQ-----------HFWKFFSKSNGVASVNR--NMIPDFFG 829

  Fly  1135 PLPCDVHLTTLRTLSDPELQLFPSASALLVLHRQGFDCSVSAGRELSMEAICPLSSKGLGNVQL- 1198
             :|..|.|          |.|.|.:...:::..:.|:   :.|..:|.. |.|| .:.|...|: 
  Fly   830 -IPESVEL----------LSLEPYSKDQILIRLENFN---TEGNVVSFN-IYPL-FESLDGYQIW 878

  Fly  1199 -----GRLSLHTIE----ATSLTGTEQKSSRESYHI------------RSLAEISLEPMELRTF 1241
                 |.:.|..::    |...||: ..||.|.||.            .|...::|.||::|||
  Fly   879 ETTLDGNMLLEDVKRFKFAQDGTGS-IPSSVEYYHAPHNPLTANSTMNASGFVVTLVPMQIRTF 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IIbNP_001262614.1 PLN02701 148..1246 CDD:178304 286/1169 (24%)
GH38N_AMII_GMII_SfManIII_like 167..514 CDD:212120 103/364 (28%)
Alpha-mann_mid 508..596 CDD:286360 29/87 (33%)
Glyco_hydro_38C 813..1241 CDD:285047 115/487 (24%)
LManINP_001260350.1 GH38N_AMII_LAM_like 2..276 CDD:212121 87/304 (29%)
Alpha-mann_mid 323..398 CDD:286360 29/86 (34%)
Glyco_hydro_38C 536..941 CDD:285047 117/507 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450136
Domainoid 1 1.000 50 1.000 Domainoid score I680
eggNOG 1 0.900 - - E1_KOG1959
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 49 1.000 Inparanoid score I462
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.790

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