DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-IIb and Man2a2

DIOPT Version :9

Sequence 1:NP_001262614.1 Gene:alpha-Man-IIb / 41913 FlyBaseID:FBgn0026616 Length:1249 Species:Drosophila melanogaster
Sequence 2:XP_008757749.1 Gene:Man2a2 / 308757 RGDID:1310238 Length:1175 Species:Rattus norvegicus


Alignment Length:1210 Identity:413/1210 - (34%)
Similarity:620/1210 - (51%) Gaps:195/1210 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 ETKSAQTSVSPEEQSEEQYTNSNWGDKCYELIQSNTNITASEEHSKFDFQPEWMRSKE--YWDRG 151
            |.:.:..|||||:.   |:.....|.| .||    ..:|.||: ..||       :.|  .|.:|
  Rat   103 EPRPSFFSVSPEDC---QFALGGRGQK-PEL----QMLTVSED-LPFD-------NVEGGVWRQG 151

  Fly   152 FEERFDAQKKDKQRPPLKIIVVPHSHNDPGWLKTFTNYFQSDSRQILNLLVTKMQEYTDMTFIWS 216
            |:..:.....|.:  .|::.|||||||||||:|||..|:...::.|||.:|:|:||.....|:|:
  Rat   152 FDISYSPNDWDAE--DLQVFVVPHSHNDPGWIKTFDKYYTEQTQHILNSMVSKLQEDPRRRFLWA 214

  Fly   217 EISFLQLWWDQAHPTKQRALKRLIDAGRIEITTGGWVMTDEANVHIYPMLDQLIEGHQWLKNNLN 281
            |:||...|||.....|:.|::||:..|::||.||||||.||||.|.:.::||||||||||:.||.
  Rat   215 EVSFFAKWWDNISAQKRAAVRRLVGNGQLEIATGGWVMPDEANSHYFALVDQLIEGHQWLERNLG 279

  Fly   282 VTPKVGWSIDPFGHGSTVPYLLSGANFEGTIIQRIHYAWKQWFARQQSGDFIWKPYWRSRKDKDS 346
            .||:.||::|||||.||:||||..||....:|||:|||.|:.||...|.:|:|:..|    |.||
  Rat   280 ATPRSGWAVDPFGHSSTMPYLLRRANLTSMLIQRVHYAIKKHFAATHSLEFMWRQTW----DSDS 340

  Fly   347 EAGSLLTHNMPFDIYSIKGSCGPHPFICLNFDFRKIPGEYTE--YSVKAQFITDDNLESKAQLLL 409
            .. .:..|.|||..|.:..:|||.|.||..|||:::||....  :.|..:.||:.|:..:|.|||
  Rat   341 ST-DIFCHMMPFYSYDVPHTCGPDPKICCQFDFKRLPGGRINCPWKVPPRAITEANVADRAALLL 404

  Fly   410 EQYARTASLFPHNVALIPVGDDFRYNKDREVDQQYQNYKKLIDHIMANRRLYNADIRFGTPSDYF 474
            :||.:.:.||..:|.|:|:||||||:|.:|.|.|:.||::|.| .:.::..::...:|||.|:||
  Rat   405 DQYRKKSRLFRSSVLLVPLGDDFRYDKPQEWDAQFFNYQRLFD-FLNSKPEFHVQAQFGTLSEYF 468

  Fly   475 EAIKERM----KDHTPGFPTFKGDFFVYSDIFSEGRPAYWSGYFTTRPFYKLLSSELEHQLRSAE 535
            :|:.:|.    ....||||...||||.|:|    ....||:||:|:|||||.|...||..||.||
  Rat   469 DALYKRTGVEPGARPPGFPVLSGDFFSYAD----REDHYWTGYYTSRPFYKSLDRVLETHLRGAE 529

  Fly   536 IVFTLAYNTARQAKRENAIKIYEKNYELIINARRNLGLFQHHDAITGTSKAAVMRDYAMRLFEST 600
            ::::||...||::.......:  .:|.::..|||.|||||||||||||:|.||:.||.:||..| 
  Rat   530 VLYSLALAHARRSGLTGQYPL--SDYAVLTEARRTLGLFQHHDAITGTAKEAVVVDYGVRLLRS- 591

  Fly   601 QNMVKMQESCLELLLQKGQPRHHGFLLSEFERDNFNKLPRKMPIQMANGDESTPTVPAGEGGAGG 665
              :|.:::..:...        |..:|.:.|..:|:  ||...:||.:...|...:|  |.....
  Rat   592 --LVSLKQVIINAA--------HYLVLGDKETYSFD--PRAPFLQMDDSRVSHDALP--ERTVIR 642

  Fly   666 SSSSGSVGSFVLYNSLAQKRLEVVTLRVQHPNVKIVNDKGVELNHIQINPVWN-----ITDTYE- 724
            ..||...  .|::|.|.|:||.||:|.|..|.|::::::|..|: :||:..|:     :.|.|: 
  Rat   643 LDSSPRF--VVVFNPLEQERLSVVSLLVNSPRVRVLSEEGQPLS-VQISVQWSSATNMVPDVYQV 704

  Fly   725 --------QGLGTSVSGTVGRIRTSTRQFEVMFVAELEPLSLSTYRVQVDEVNFKRNIATIYCDD 781
                    .|||                     |.:|:|.....|.:|        :...:|.:.
  Rat   705 SVPVRLPALGLG---------------------VLQLQPDLDGPYTLQ--------SSVHVYLNG 740

  Fly   782 CTESQPASVSPPEEIESSPTSVFEARGKPAGDIQLENPHMRLLFDEKSGFLKTITRKNQKKELLK 846
            ...|.....:.|..:..|.||          |..:.|.:|::.|...:|.||::.|.::::|   
  Rat   741 VKLSVSRQTTFPLRVVDSGTS----------DFAISNRYMQVWFSGLTGLLKSVRRVDEEQE--- 792

  Fly   847 PLQCNIKFAAY--RSAQFHSGAYLFKTDPEQSEAEKEVLEGYTDMRIIITSGPIASDVTVIYGPF 909
             .|.::|...|  |:::..||||||..|   :||:..|.:....:|  :|.||..|:|...|..|
  Rat   793 -QQVDMKLFVYGTRTSKDKSGAYLFLPD---NEAKPYVPKKPPVLR--VTEGPFFSEVAAYYEHF 851

  Fly   910 LAHTVRIFNTRTHLDAAIYVENDIDFEPPPKNR-ETELFMRFVTNIDNIAQAPMQRDPLKEPVDA 973
             ...:|::|    |.....:..|:.|:...::. ..||.:|..|:||:..               
  Rat   852 -HQVIRLYN----LPGVEGLSLDVSFQVDIRDYVNKELALRIHTDIDSQG--------------- 896

  Fly   974 ATMPELPVFYSDQNGFQYHERIKVPAIGIEGNYFPITSGAFIQDSRLRLTLLTTHAQGAASYEPG 1038
                   .|::|.||||...|..:..:.::.|::|:...|:||||:.||||.|..|.|.:|...|
  Rat   897 -------TFFTDLNGFQVQPRKYLKKLPLQANFYPMPVMAYIQDSQRRLTLHTAQALGVSSLGNG 954

  Fly  1039 QLEVMLDRRTLYDDYRGMGEGVVDSRLTRHKFWLLVEDLPGGQHVTQPPSYKVLSQQAQQL---- 1099
            ||||:||||.:.||.||:|:|:.|:::|.:.|.||:|     :.....|.....|:.|...    
  Rat   955 QLEVILDRRLMQDDNRGLGQGLKDNKITCNHFRLLLE-----RRTLMSPEPGFFSKLAAMFRGLI 1014

  Fly  1100 --ANALR-----------YPPNLYFVSN--LEQPELAAALLPLVR----------LLP-KGPLPC 1138
              :|.:|           ||..|..:::  |..|.|   :||:.:          ..| ..||||
  Rat  1015 FSSNTIRNSKVQQERSTSYPSLLSHMTSMYLNTPPL---VLPVAKRESTSPTLHSFHPLASPLPC 1076

  Fly  1139 DVHLTTLRTLSDPELQLFPSASALLVLHRQGFDCSVSAGRELSMEAICPLSSKGLGNVQLGRLSL 1203
            |.||..||.|  |.....|:|.|.|:|||:||||.:.| :.|............||::..| |.:
  Rat  1077 DFHLLNLRML--PAEDTLPAADAALILHRKGFDCGLEA-KNLGFNCTTSQGKLALGSLFHG-LDV 1137

  Fly  1204 HTIEATSLTGTEQKSSRESYHIRSLAEISLEPMELRTFNL 1243
            ..::.||||.....:|..     :..:|||||||:.||.|
  Rat  1138 LFLQPTSLTLLYPLASPS-----NSTDISLEPMEISTFRL 1172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IIbNP_001262614.1 PLN02701 148..1246 CDD:178304 396/1149 (34%)
GH38N_AMII_GMII_SfManIII_like 167..514 CDD:212120 160/352 (45%)
Alpha-mann_mid 508..596 CDD:286360 43/87 (49%)
Glyco_hydro_38C 813..1241 CDD:285047 139/460 (30%)
Man2a2XP_008757749.1 PLN02701 140..1174 CDD:178304 399/1164 (34%)
CE4_SF 165..508 CDD:301698 160/352 (45%)
Alpha-mann_mid 503..588 CDD:214875 43/86 (50%)
Glyco_hydro_38C 761..1170 CDD:285047 140/471 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341789
Domainoid 1 1.000 98 1.000 Domainoid score I7009
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55783
OrthoDB 1 1.010 - - D1101882at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102728
Panther 1 1.100 - - LDO PTHR11607
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.720

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