DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-IIb and aman-2

DIOPT Version :9

Sequence 1:NP_001262614.1 Gene:alpha-Man-IIb / 41913 FlyBaseID:FBgn0026616 Length:1249 Species:Drosophila melanogaster
Sequence 2:NP_505995.2 Gene:aman-2 / 179632 WormBaseID:WBGene00010284 Length:1145 Species:Caenorhabditis elegans


Alignment Length:1309 Identity:383/1309 - (29%)
Similarity:607/1309 - (46%) Gaps:250/1309 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CIGLLSAFVTILLCLYYISIGQPNPTPISETGAPSAALRGSPLSGL-------------TGFSVD 64
            |:|:   |:|:.|.||       |..   ||||.:...|...:..|             .|.::|
 Worm    11 CLGV---FLTVSLYLY-------NGI---ETGAEALTKRQRYVDDLRRKIGNLEHVAEENGRTID 62

  Fly    65 GGSSSIIHQQKQQLVIASNQKKSSETKSA---QTSVSP-------------EEQSEEQYTNSNWG 113
            .....:...:.::.|....:|:.:|.|..   :..|:|             .:..:......:..
 Worm    63 RLEQEVQRAKAEKSVDFDEEKEKTEEKEVEKEEKEVAPVPVRGNRGEMAHIHQVKQHIKPTPSMK 127

  Fly   114 DKCYELIQSNTNITASEEHSKFDFQPEWMRSKE---YWDRGFEERFDAQKKDKQRPPLKIIVVPH 175
            |.|.  |:.|.:| |..:....|....|.....   .|.:|::..:||:|. |..|.|::||:||
 Worm   128 DVCG--IRENVSI-AHSDLQMLDLYDTWKFENPDGGVWKQGWKIEYDAEKV-KSLPRLEVIVIPH 188

  Fly   176 SHNDPGWLKTFTNYFQSDSRQILNLLVTKMQEYTDMTFIWSEISFLQLWW-DQAHPTKQRALKRL 239
            ||.||||:.||..|:...:|.||:.:...:.|..:|.||::||||.:.|| |||...|:: :|..
 Worm   189 SHCDPGWIMTFEEYYNRQTRNILDGMAKHLAEKDEMRFIYAEISFFETWWRDQADEIKKK-VKGY 252

  Fly   240 IDAGRIEITTGGWVMTDEANVHIYPMLDQLIEGHQWLKNNL--NVTPKVGWSIDPFGHGSTVPYL 302
            ::||:.||.|||||||||||.|.:.|:.:|.|||:|::|:|  :..|:..|||||||...::|:|
 Worm   253 LEAGKFEIVTGGWVMTDEANAHYHSMITELFEGHEWIQNHLGKSAIPQSHWSIDPFGLSPSMPHL 317

  Fly   303 LSGANFEGTIIQRIHYAWKQWFARQQSGDFIWKPYWRSRKDKDSEAGSLLTHNMPFDIYSIKGSC 367
            |:.||....:|||:||:.|:..|.:::.:|.|:..:.|....|     |.:|.|||..|.|..:|
 Worm   318 LTSANITNAVIQRVHYSVKRELALKKNLEFYWRQLFGSTGHPD-----LRSHIMPFYSYDIPHTC 377

  Fly   368 GPHPFICLNFDFRKIP--GEYTEYSVKAQFITDDNLESKAQLLLEQYARTASLFPHNVALIPVGD 430
            ||.|.:|..||||::|  |:..::.:..|.|.|||:..:|:::.:||.:.:.||.:||...|:||
 Worm   378 GPEPSVCCQFDFRRMPEGGKSCDWGIPPQKINDDNVAHRAEMIYDQYRKKSQLFKNNVIFQPLGD 442

  Fly   431 DFRYNKDREVDQQYQNYKKLIDHIMANRRLYNADIRFGTPSDYFEAIKERMKDHTPGFPTFKGDF 495
            ||||:.|.|.:.||:|||||.:: |.::..:|...:|||.||||:.:...:.......|||.|||
 Worm   443 DFRYDIDFEWNSQYENYKKLFEY-MNSKSEWNVHAQFGTLSDYFKKLDTAISASGEQLPTFSGDF 506

  Fly   496 FVYSDIFSEGRPAYWSGYFTTRPFYKLLSSELEHQLRSAEIVFTLAYNTARQAKRENAIKIYEKN 560
            |.|:|....    |||||||:|||||.|...|:|.||||||.|||| |...:...|  .||:|| 
 Worm   507 FTYADRDDH----YWSGYFTSRPFYKQLDRVLQHYLRSAEIAFTLA-NIEEEGMVE--AKIFEK- 563

  Fly   561 YELIINARRNLGLFQHHDAITGTSKAAVMRDYAMRLFESTQNMVKMQESCLELLL-----QKGQP 620
               ::.|||.|.||||||.:|||:|..|:.||..::.::......:....|.:||     .|.|.
 Worm   564 ---LVTARRALSLFQHHDGVTGTAKDHVVLDYGQKMIDALNACEDILSEALVVLLGIDSTNKMQM 625

  Fly   621 RHHGFLLSEFERDNFNKLPRKMPIQMANGDESTPTVPAGEGGAGGSSSSGSVGSFVLYNSLAQKR 685
            ..|        |.|.|.||.|...::..                         :.||:|:|::.|
 Worm   626 DEH--------RVNENLLPEKRVYKIGQ-------------------------NVVLFNTLSRNR 657

  Fly   686 LEVVTLRVQHPNVKIVNDKGVE----LNHIQINPVWNITDTYEQGLGTSVSGTVGRIRTSTRQFE 746
            .|.:.::|..      .|.|||    :...|::||    ..|::...|.|        .....||
 Worm   658 NEPICIQVDS------LDAGVEADPPIKKQQVSPV----IAYDEEKKTLV--------VKNGIFE 704

  Fly   747 VMFVAELEPLSLSTYRVQVDEVNFKRNIATIYCDDCTESQPASVSPPEEIESSPTSVFEARGKPA 811
            :.|:..|.|:...::|:..:....|..|.|   ::..|.:..|      .:||.||         
 Worm   705 LCFMLSLGPMESVSFRLVKNTTTSKVEIIT---NNAAEFKETS------FKSSSTS--------- 751

  Fly   812 GDIQLENPHMRLLFDEKSGFLKTITRKNQKKELL--KPLQCNIKFAAYRSAQFH----------- 863
            ||..::|..:...||.::|.:|..|      .|:  ||:..|..|..|.:.:..           
 Worm   752 GDFTVKNDKVEAEFDGENGMIKRAT------SLVDDKPIDLNSHFIHYGARKSKRKFANGNEDNP 810

  Fly   864 SGAYLFKTDPEQSEAEKEVLEGYTDMRIIITSGPIASDVTVIYGPFLAHTVRIFNTRTHLDAAIY 928
            :|||||..|.|..|.:|:..:.      |:..|.:...|.....    :.::|..|.|......:
 Worm   811 AGAYLFLPDGEARELKKQSSDW------ILVKGEVVQKVFATPN----NDLKILQTYTLYQGLPW 865

  Fly   929 VENDIDFEPPPKNRET-ELFMRFVTNIDNIAQAPMQRDPLKEPVDAATMPELPVFYSDQNGFQYH 992
            :  |:|.|...:::|. ||.:||.:::::..:                      |::|.||.|..
 Worm   866 I--DLDNEVDVRSKENFELALRFSSSVNSGDE----------------------FFTDLNGMQMI 906

  Fly   993 ERIKVPAIGIEGNYFPITSGAFIQDSRLRLTLLTTHAQGAASYEPGQLEVMLDRRTLYDDYRGMG 1057
            :|.:...:..:.|::|:::|.:|:|...|:::.:..|.|.:|...||:|:|||||...||.||:.
 Worm   907 KRRRQTKLPTQANFYPMSAGVYIEDDTTRMSIHSAQALGVSSLSSGQIEIMLDRRLSSDDNRGLQ 971

  Fly  1058 EGVVDSRLTRHKFWLLVEDLPGGQHVTQPPSYKVLSQQAQQLANALRYP---------PNLYFVS 1113
            :||.|::.|...|.:::|.:.......:.......|........:|.||         |......
 Worm   972 QGVRDNKRTVAHFRIVIEPMSSSSGNKKEERVGFHSHVGHLATWSLHYPLVKMIGDATPKSISSK 1036

  Fly  1114 NLEQPELAAALLPLVRLLPKGPLPCDVHLTTLRTLSDP------ELQLFPSASALLVLHRQGFDC 1172
            |:||                 .|.||:||.|.|||:.|      |........|.:|:||...||
 Worm  1037 NVEQ-----------------ELNCDLHLVTFRTLASPTTYEANERSTAAEKKAAMVMHRVVPDC 1084

  Fly  1173 SVSAGRELSMEAICPLSSKGLGNVQLGRLS-LHTIEATSLTGTEQKSSRESYHIRSLAEISLEPM 1236
               ..|....:..|  .:.||....|..:| |.:.:.||||...:.:..|.:.        |:|.
 Worm  1085 ---RSRLTLPDTSC--LATGLEIEPLKLISTLKSAKKTSLTNLYEGNKAEQFR--------LQPN 1136

  Fly  1237 ELRTFNLTF 1245
            ::.:..::|
 Worm  1137 DISSILVSF 1145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IIbNP_001262614.1 PLN02701 148..1246 CDD:178304 353/1142 (31%)
GH38N_AMII_GMII_SfManIII_like 167..514 CDD:212120 148/351 (42%)
Alpha-mann_mid 508..596 CDD:286360 48/87 (55%)
Glyco_hydro_38C 813..1241 CDD:285047 108/457 (24%)
aman-2NP_505995.2 PLN02701 142..1124 CDD:178304 351/1131 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4542
OMA 1 1.010 - - QHG55783
OrthoDB 1 1.010 - - D1101882at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102728
Panther 1 1.100 - - LDO PTHR11607
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.740

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