DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-IIb and Man2b2

DIOPT Version :9

Sequence 1:NP_001262614.1 Gene:alpha-Man-IIb / 41913 FlyBaseID:FBgn0026616 Length:1249 Species:Drosophila melanogaster
Sequence 2:NP_032576.2 Gene:Man2b2 / 17160 MGIID:1195262 Length:1018 Species:Mus musculus


Alignment Length:1210 Identity:283/1210 - (23%)
Similarity:443/1210 - (36%) Gaps:348/1210 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 PLKIIVVPHSHNDPGWLKTFTNYFQSDSRQILNLLVTKMQEYTDMTFIWSEISFLQLWWD-QAHP 230
            |::..||||||.|.||:.|.....::.:..:...:|.::.......||..|..|.:|||| .|..
Mouse    26 PIRAFVVPHSHMDVGWVFTVQESMRAYAANVYTTVVAELVRGGQRRFIAVEQEFFRLWWDGVASE 90

  Fly   231 TKQRALKRLIDAGRIEITTGGWVMTDEANVHIYPMLDQLIEGHQWLKNNLNVTPKVGWSIDPFGH 295
            .:::.:::|:..||:|...||.||.|||..|:...:.||.|||.:|.....:.|:..|.:||||.
Mouse    91 QQKQQVRQLLHEGRLEFVLGGQVMHDEAVTHLDDQILQLTEGHGFLYETFGIRPQFSWHVDPFGA 155

  Fly   296 GSTVPYLLSGANFEGTIIQRIHYAWKQWFARQQSGDFIW--KPYWRSRKDKDSEAGSLLTHNMPF 358
            .:|.|.|.:.|.|...:|.||.|..|......|...|:|  .|....:::       :.||.|  
Mouse   156 SATTPTLFALAGFNAHLISRIDYDLKDAMQEAQMLQFVWHGSPSLSGQQE-------IFTHVM-- 211

  Fly   359 DIYSIKGSCGPHPFICLNFDFRKIPGEYTE-------------YSVKAQFITDDNLESKAQLLLE 410
            |.||.   |.|.     :..|....|.|..             |...::.:|..|:...|:.|:.
Mouse   212 DHYSY---CTPS-----HIPFSNRSGFYWNGVAVFPEPPPDGVYPNMSEPVTGANIHLYAEALVA 268

  Fly   411 QYARTASLF--PHNVALIPVGDDFRYNKDREVDQQYQNYKKLIDHIMANRRLYNADIRFGTPSDY 473
            ...:.|:.|  ||  .|.|.|.|.::   .....|:.|...|:|:|......:...:::.|.:||
Mouse   269 NVKQRAAWFRTPH--VLWPWGCDKQF---FNASVQFDNMDPLLDYINQRTAQFGISVQYATLNDY 328

  Fly   474 FEAIKER-----MKDHTPGFPTFKGDFFVYSDIFSEGRPAYWSGYFTTRPFYKLLSSELEHQLRS 533
            |:|:...     ::||.        ||..||   ||...| |:|::|:|...|.|:.:....|.:
Mouse   329 FQALHATNMTWGIRDHQ--------DFLPYS---SEPLQA-WTGFYTSRSTLKGLARQASALLYA 381

  Fly   534 AEIVF----------TLAYNTARQAKRENAIKIYEKNYELIINARRNLGLFQHHDAITGTSKAAV 588
            .|.:|          ||....|.|..::....:.|               .|||||||||....|
Mouse   382 GESMFTRYMWPDPSGTLDPTWALQQLQQLRWAVSE---------------VQHHDAITGTESPKV 431

  Fly   589 MRDYAMRLFESTQNMVKMQESCLELLLQKGQPRHHGFLLSEFERDNFNKLPRKMPIQMANGDEST 653
            ...|...|   ...|:.:::..:.:.|  |.|...|           ...|:.:     .|.:.|
Mouse   432 KNMYTEHL---RMGMLGVRKLMVSIAL--GGPPGSG-----------TGAPKDI-----MGPQVT 475

  Fly   654 PTVPAGEGGAGGSSSSGSVGSFVLYNSLAQKRLEVVTLRVQHPNVKIVNDKGVELNHIQINPVWN 718
            |.:.......|.|:|        :||.||.|...::||.|..|||.:.:    ||.|.....:.|
Mouse   476 PVLSVDTRPVGYSAS--------VYNPLAWKITTIITLTVAFPNVSVTD----ELGHPVSTQIQN 528

  Fly   719 IT---DTYEQGLGTSVSGTVGRIRTSTRQFEVMFVAELEPLSLSTYRVQVDEVNFKRNIA----T 776
            .|   ..|:..:.|::.|      .:.|.::||             ..:.|:...:..:|    |
Mouse   529 STKDPSAYDLLILTTIPG------LNYRHYQVM-------------HARGDQAGTRELVAPRANT 574

  Fly   777 IYCDDCTESQPASVSPPEEIESSPTSVFEARGKPAGDIQLENPHMRLLFDEKSGFLKTITRKNQK 841
            :.......:||:.                 .||..  :.:.|....||||:.:..|.:|    |.
Mouse   575 LKFSLKLRNQPSQ-----------------EGKRL--VPVMNDCYILLFDQDTNMLHSI----QD 616

  Fly   842 KELLKPLQCNIKFAAYRSAQFH------SGAYLF----KTDPEQSEAEKEVLEGYTDMRIIITSG 896
            ::..:.::...:|..|: |.:.      |..|||    ..:|.......|::           :|
Mouse   617 RQSNRTVRMTQEFLEYQ-ANWDVKQGPISDNYLFAPNNTAEPSWEAVGMEMV-----------AG 669

  Fly   897 PIASDVTVIYGPFLAHTVRIFNTRTHLD--------AAIYVENDIDFEPPPKNRETELFMRFVTN 953
            .:.:|:...:..::.....|::..|.|.        ....:|......|...|||..|    .|:
Mouse   670 TLVTDIRQYFYRYITDQEYIYSIHTRLAHPSLAGELLCQRIEQQYRVGPLDLNREAIL----RTS 730

  Fly   954 IDNIAQAPMQRDPLKEPVDAATMPELPVFYSDQNGFQYHERIKVP-----AIGIEGNYFPITSGA 1013
            .|..:|                    .|.|||.||:|...|   |     :..|..||:|:...|
Mouse   731 SDLNSQ--------------------QVLYSDNNGYQMQRR---PYKAFKSNPIPRNYYPMVQSA 772

  Fly  1014 FIQDSRLRLTLLTTHAQGAASYEPGQLEVMLDRR---TLYDDYRGMGEGVVDSRLTRHKFWLLV- 1074
            ||:|.:.||.||.....|.:|...||:||||.||   .|..|.: ....:.|:.:.....||:: 
Mouse   773 FIEDDKSRLVLLAERPHGVSSQGNGQVEVMLHRRLWNNLAWDLK-YNLTLNDTSIVHPVLWLMLG 836

  Fly  1075 -----------------------------EDLP-GGQH----VTQPPS--YKVLS--------QQ 1095
                                         |:.| .|.|    ||.||:  .::||        ..
Mouse   837 PKSTMTALHPRSGVALQHGPVVLLKELADEETPVHGPHNPWPVTLPPNLHLQILSVPGWTYSRSH 901

  Fly  1096 AQQLANALRYPPNLYFVSNLEQPE--LAAALLPLVRLLPKGPLPCDVHLTTLRTLSDPELQLFPS 1158
            ||.|.|..|..|        |:|:  |...||.|..|...|              .||.|....:
Mouse   902 AQHLRNLQRGHP--------EKPQANLQRVLLRLRHLYEAG--------------EDPVLSRPAT 944

  Fly  1159 ASALLVLHRQGFDCSVSAGRELSMEAICPLSSKGLGNVQLGRLSLHTIEATSLTGTEQKSSRESY 1223
            ....:||                         :|||:|.       .:|..|||||......:.:
Mouse   945 VDLKVVL-------------------------RGLGSVV-------AVEERSLTGTWDVQMLQRW 977

  Fly  1224 HIRSLAE-----------------ISLEPMELRTFNLTFR 1246
            |..:..:                 |::.|.|:|||.:.|:
Mouse   978 HWSTKTDHLKGHPTSPPRPPGGSIITVYPKEIRTFFIKFQ 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IIbNP_001262614.1 PLN02701 148..1246 CDD:178304 282/1208 (23%)
GH38N_AMII_GMII_SfManIII_like 167..514 CDD:212120 104/369 (28%)
Alpha-mann_mid 508..596 CDD:286360 26/97 (27%)
Glyco_hydro_38C 813..1241 CDD:285047 111/517 (21%)
Man2b2NP_032576.2 GH38N_AMII_Epman_like 27..352 CDD:212122 98/357 (27%)
Alpha-mann_mid 358..439 CDD:214875 25/95 (26%)
Glyco_hydro_38C 491..1012 CDD:285047 140/660 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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