DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-IIb and man2b2

DIOPT Version :9

Sequence 1:NP_001262614.1 Gene:alpha-Man-IIb / 41913 FlyBaseID:FBgn0026616 Length:1249 Species:Drosophila melanogaster
Sequence 2:NP_001106515.1 Gene:man2b2 / 100127706 XenbaseID:XB-GENE-1006292 Length:990 Species:Xenopus tropicalis


Alignment Length:1178 Identity:266/1178 - (22%)
Similarity:438/1178 - (37%) Gaps:306/1178 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 PLKIIVVPHSHNDPGWLKTFTNYFQSDSRQILNLLVTKMQEYTDMTFIWSEISFLQLWWDQ-AHP 230
            |::..|:||||.|.||:.|......:.:..:...:|.::.......||..|..|.:|||.. |..
 Frog    21 PIQAFVIPHSHMDVGWVYTVQESMHAYAANVYTTVVEELMRGDRRRFIVVEQEFFRLWWKLFAGN 85

  Fly   231 TKQRALKRLIDAGRIEITTGGWVMTDEANVHIYPMLDQLIEGHQWLKNNLNVTPKVGWSIDPFGH 295
            .:::.:.:|:..||:|...||.||.|||...|...:.||.|||.::.....|.|:..|.:||||.
 Frog    86 VEKQQVHQLMREGRLEFVIGGQVMHDEALTTIDDQILQLTEGHGFIYETFGVRPRFSWHVDPFGA 150

  Fly   296 GSTVPYLLSGANFEGTIIQRIHYAWKQWFARQQSG---DFIWK--PYWRSRKDKDSEAGSLLTHN 355
            .:..|.|.:.|.|.|.:|.||.|..|   |..|:|   .|||:  |   |..||.    .:.||.
 Frog   151 SAASPTLFAMAGFNGHLISRIDYDTK---ADMQNGKELQFIWRASP---SLSDKQ----EIFTHV 205

  Fly   356 MPFDIYSIKGSCGPH--PF----------ICLNFDFRKIPGEYTEYSVKAQFITDDNLESKAQLL 408
            |  |.||.   |.|.  ||          |.:..|..| .|.|...|:.   :|.|.:...|:.:
 Frog   206 M--DQYSY---CTPSYIPFSDRSGFYWNGIAVFPDPPK-DGMYPNMSLP---VTADTIHPYAETM 261

  Fly   409 LEQYARTASLFPHNVALIPVGDDFRYNKDREVDQQYQNYKKLIDHIMANRRLYNADIRFGTPSDY 473
            ::.....|:.|..:..|.|.|.|.::   .....|:.|...|:|:|..:.. :...:::.|..||
 Frog   262 VKNIKERAAWFRSSDVLWPWGCDKQF---FNASVQFNNMDLLLDYINKHTE-FGVTVQYSTLGDY 322

  Fly   474 FEAIKERMKDHTPGFPTFKG--DFFVYSDIFSEGRPAYWSGYFTTRPFYKLLSSELEHQLRSAEI 536
            |:.:..|  :.|.|   .:|  ||..||...|:.    |:|::|:|...|.::......|.:||.
 Frog   323 FKNLYNR--NLTWG---LRGSQDFLPYSSDSSQA----WTGFYTSRNVLKGVARRASSLLYAAES 378

  Fly   537 VFT---LAYNTARQAKRENAIKIYEKNYELIINARRNLGLFQHHDAITGTSKAAVMRDYAMRLFE 598
            .|.   |.:.|.      :..|::.  .|.:.:.|..:...||||.||||....|...|...|.:
 Frog   379 AFAQHLLKHPTG------SVEKVWA--MEQLRSLRWAVSEVQHHDGITGTESPKVRDMYIANLLQ 435

  Fly   599 STQNMVKMQESCLELLLQKGQPRHHGFLLSEFERDNFNKLPRKMPIQMANGDESTPTVPAGEGGA 663
            ....:.|                    |::....|.:                            
 Frog   436 GAAGVRK--------------------LMAAIVMDLY---------------------------- 452

  Fly   664 GGSSSSGSVG----SFVLYNSLAQKRLEVVTLRVQHPNVKIVNDKGVELNHIQINPVWNITDTYE 724
              ||.:.|.|    :..:||.||                                  |::|....
 Frog   453 --SSQANSCGNGYINITVYNPLA----------------------------------WDVTTFVL 481

  Fly   725 QGLGTSVSGTV--------GRIRTST---RQFEVMFVAELEPLSLSTYRVQVDEVNFKRNIATIY 778
            ..:..||||..        .:|:.:|   ..|::..:..|:.||...|.:::..           
 Frog   482 VPMNNSVSGVYDKFGQPVPAQIQNATEPSNAFDLHILVTLKGLSYGRYSIKLGS----------- 535

  Fly   779 CDDCTESQPASVSPPEEIESSPTSVFEARGKPAGDIQLENPHMR----LLFDEKSGFLKTITRKN 839
            ||...:.....        ...|.|.:.:...|....|..|.|.    ::.|:.:..|.:||   
 Frog   536 CDAANDRLVTG--------RKITFVRQPKRNKAKRQNLVTPIMNDCYTVVIDQNTNLLHSIT--- 589

  Fly   840 QKKELLKPLQCNIKFAAYRS-AQFHSGA----YLF-KTDPEQSEAEKEVLEGYTDMRIIITSGPI 898
             .:|..:.:|...:|..|.| .....|.    ||| .|.|        .:..|..:.:.|.:|.:
 Frog   590 -ARESNQTVQVTQEFLEYHSNGDISKGPISDNYLFTSTGP--------AISAYKAVGLEIIAGKL 645

  Fly   899 ASDV-TVIYGPFLAHTV------RIFNTRTHLDAAI---YVENDIDFEPPPKNRETELFMRFVTN 953
            .::: ...|....|.|.      ||:|.....|.::   ::|......|...|||:  .:|..|:
 Frog   646 VTEIRQYFYSNITAQTYLYAVYSRIYNVPEGYDKSLVCHHIEQSYRVGPMDLNRES--IIRTSTD 708

  Fly   954 IDNIAQAPMQRDPLKEPVDAATMPELPVFYSDQNGFQYHER--IKVPAIGIEGNYFPITSGAFIQ 1016
                    ::.|.|              .|:|.||:|...|  .......:..||:|:...|:|:
 Frog   709 --------LRTDRL--------------IYTDNNGYQMQRRQFKNYDTNTVARNYYPMVRTAYIE 751

  Fly  1017 DSRLRLTLLTTHAQGAASYEPGQLEVMLDRRTLYDDYR---GMGEGVVDSRLTRHKFWLLVEDLP 1078
            |:..||..|:..|.|.:|.:.|::|:||.|| |:::..   .....:.|:.:.|...||::    
 Frog   752 DNSTRLVFLSERAHGVSSQDNGEVEIMLHRR-LWNNLEWDLNYNLTLNDTSVVRPTIWLML---- 811

  Fly  1079 GGQHVTQPPSYKVLSQQAQQLANALRYPPNLYFV--SNLEQPELAAALLPLVRLLPKGPLPCDVH 1141
             |........|       |:|..||.:.|.:.:.  :..|:.......||:.       ||.::|
 Frog   812 -GSRALAGALY-------QRLGMALEHRPLVIYSLHTGQEKRSYKTTDLPIT-------LPDNIH 861

  Fly  1142 LTTLR--------------------TLSDPELQLFPSASALLVLHRQGFDCSVSAGRELSMEAIC 1186
            |..|.                    .:.|...........|..|:....|..:|....::::::.
 Frog   862 LQILSIPGWFYSSRHHEHMQDIHTGNIRDNVADFHRVLLRLQHLYETNEDPVLSKPVTINLQSLL 926

  Fly  1187 PLSSKGLGNVQL-------GRLSLHTIE----ATSLTGTEQKSSRESYHIRSLAE--ISLEPMEL 1238
                ||||.|.|       |...:||::    ..::.||:|:.     |....::  |:|.|.|:
 Frog   927 ----KGLGTVSLVEERSLTGTWDIHTLKRWKWKANIKGTDQRE-----HTLGTSDFTITLSPKEI 982

  Fly  1239 RTFNLTFR 1246
            ||..:.|:
 Frog   983 RTLFVYFQ 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IIbNP_001262614.1 PLN02701 148..1246 CDD:178304 265/1176 (23%)
GH38N_AMII_GMII_SfManIII_like 167..514 CDD:212120 108/366 (30%)
Alpha-mann_mid 508..596 CDD:286360 24/90 (27%)
Glyco_hydro_38C 813..1241 CDD:285047 104/487 (21%)
man2b2NP_001106515.1 GH38N_AMII_Epman_like 22..346 CDD:212122 103/351 (29%)
Alpha-mann_mid 352..433 CDD:214875 24/88 (27%)
Glyco_hydro_38C 567..985 CDD:285047 103/482 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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